RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 MT1MQ8N339 61 aa5.24□□□□□ -1.57
TMCO3-209ENST00000619336 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
TMCO3-209ENST00000619336 Q1T7F1 81 aa5.22□□□□□ -1.57
TMCO3-209ENST00000619336 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
TMCO3-209ENST00000619336 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
TMCO3-209ENST00000619336 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
TMCO3-209ENST00000619336 A0A0D9SG42 100 aa5.16□□□□□ -1.58
TMCO3-209ENST00000619336 PSPHP1O15172 72 aa5.16□□□□□ -1.58
TMCO3-209ENST00000619336 UQCR11O14957 56 aa5.14□□□□□ -1.59
TMCO3-209ENST00000619336 MT1LQ93083 61 aa5.14□□□□□ -1.59
TMCO3-209ENST00000619336 SPATA8Q6RVD6 105 aa5.13□□□□□ -1.59
TMCO3-209ENST00000619336 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
TMCO3-209ENST00000619336 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
TMCO3-209ENST00000619336 A6NED7 52 aa5.05□□□□□ -1.6
TMCO3-209ENST00000619336 SPINT4Q6UDR6 99 aa5.03□□□□□ -1.6
TMCO3-209ENST00000619336 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
TMCO3-209ENST00000619336 A8MU10 97 aa5□□□□□ -1.61
TMCO3-209ENST00000619336 K7ERS5 55 aa4.98□□□□□ -1.61
TMCO3-209ENST00000619336 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
TMCO3-209ENST00000619336 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
TMCO3-209ENST00000619336 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
TMCO3-209ENST00000619336 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
TMCO3-209ENST00000619336 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
TMCO3-209ENST00000619336 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
TMCO3-209ENST00000619336 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
TMCO3-209ENST00000619336 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
TMCO3-209ENST00000619336 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
TMCO3-209ENST00000619336 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
TMCO3-209ENST00000619336 TNP1P09430 55 aa4.7□□□□□ -1.66
TMCO3-209ENST00000619336 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
TMCO3-209ENST00000619336 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
TMCO3-209ENST00000619336 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
TMCO3-209ENST00000619336 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
TMCO3-209ENST00000619336 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
TMCO3-209ENST00000619336 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
TMCO3-209ENST00000619336 ROMO1P60602 79 aa4.62□□□□□ -1.67
TMCO3-209ENST00000619336 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
TMCO3-209ENST00000619336 KRTAP5-8O75690 187 aa4.55□□□□□ -1.68
TMCO3-209ENST00000619336 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
TMCO3-209ENST00000619336 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
TMCO3-209ENST00000619336 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
TMCO3-209ENST00000619336 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
TMCO3-209ENST00000619336 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
TMCO3-209ENST00000619336 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
TMCO3-209ENST00000619336 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
TMCO3-209ENST00000619336 MT1AP04731 61 aa4.35□□□□□ -1.71
TMCO3-209ENST00000619336 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
TMCO3-209ENST00000619336 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
TMCO3-209ENST00000619336 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
TMCO3-209ENST00000619336 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
TMCO3-209ENST00000619336 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
TMCO3-209ENST00000619336 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
TMCO3-209ENST00000619336 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
TMCO3-209ENST00000619336 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
TMCO3-209ENST00000619336 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
TMCO3-209ENST00000619336 MT3P25713 68 aa3.99□□□□□ -1.77
TMCO3-209ENST00000619336 H3BS24 57 aa3.77□□□□□ -1.81
TMCO3-209ENST00000619336 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
TMCO3-209ENST00000619336 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
TMCO3-209ENST00000619336 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
TMCO3-209ENST00000619336 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
TMCO3-209ENST00000619336 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
TMCO3-209ENST00000619336 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
TMCO3-209ENST00000619336 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
TMCO3-209ENST00000619336 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
TMCO3-209ENST00000619336 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
TMCO3-209ENST00000619336 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
TMCO3-209ENST00000619336 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
TMCO3-209ENST00000619336 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
TMCO3-209ENST00000619336 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
TMCO3-209ENST00000619336 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
TMCO3-209ENST00000619336 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
TMCO3-209ENST00000619336 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.97
TMCO3-209ENST00000619336 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
TMCO3-209ENST00000619336 INE1O15225 51 aa2.72□□□□□ -1.97
TMCO3-209ENST00000619336 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
TMCO3-209ENST00000619336 PRM1P04553 51 aa2.37□□□□□ -2.03
TMCO3-209ENST00000619336 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 112.6 ms