RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 NISCHQ9Y2I1 1504 aa37.24■■■■□ 3.55
TMCO3-209ENST00000619336 ABCC9O60706 1549 aa34.04■■■■□ 3.04
TMCO3-209ENST00000619336 CCDC180Q9P1Z9 1646 aa33.61■■■□□ 2.97
TMCO3-209ENST00000619336 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
TMCO3-209ENST00000619336 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
TMCO3-209ENST00000619336 NACADO15069 1562 aa31.85■■■□□ 2.69
TMCO3-209ENST00000619336 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
TMCO3-209ENST00000619336 PABPN1Q86U42 306 aaKnown RBP eCLIP31.63■■■□□ 2.65
TMCO3-209ENST00000619336 UNC13AQ9UPW8 1703 aa31.53■■■□□ 2.64
TMCO3-209ENST00000619336 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
TMCO3-209ENST00000619336 MYO15BQ96JP2 1530 aa31.23■■■□□ 2.59
TMCO3-209ENST00000619336 ZCCHC6Q5VYS8 1495 aaKnown RBP30.79■■■□□ 2.52
TMCO3-209ENST00000619336 SHROOM4Q9ULL8 1493 aa30.75■■■□□ 2.51
TMCO3-209ENST00000619336 CC2D2AQ9P2K1 1620 aa30.73■■■□□ 2.51
TMCO3-209ENST00000619336 DCAF1Q9Y4B6 1507 aa30.69■■■□□ 2.5
TMCO3-209ENST00000619336 CECR2Q9BXF3 1484 aa30.69■■■□□ 2.5
TMCO3-209ENST00000619336 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
TMCO3-209ENST00000619336 EIF4G1Q04637 1599 aaKnown RBP30.55■■■□□ 2.48
TMCO3-209ENST00000619336 DNAJC5Q9H3Z4 198 aa29.9■■■□□ 2.38
TMCO3-209ENST00000619336 CUX2O14529 1486 aa29.46■■■□□ 2.31
TMCO3-209ENST00000619336 ERCC6Q03468 1493 aa29.41■■■□□ 2.3
TMCO3-209ENST00000619336 NCAPD3P42695 1498 aa29.4■■■□□ 2.3
TMCO3-209ENST00000619336 ATAD2BQ9ULI0 1458 aa29.28■■■□□ 2.28
TMCO3-209ENST00000619336 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
TMCO3-209ENST00000619336 HMGXB3Q12766 1538 aa29.16■■■□□ 2.26
TMCO3-209ENST00000619336 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
TMCO3-209ENST00000619336 NESP48681 1621 aa29.14■■■□□ 2.26
TMCO3-209ENST00000619336 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
TMCO3-209ENST00000619336 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
TMCO3-209ENST00000619336 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
TMCO3-209ENST00000619336 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
TMCO3-209ENST00000619336 LAMC3Q9Y6N6 1575 aa28.82■■■□□ 2.2
TMCO3-209ENST00000619336 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
TMCO3-209ENST00000619336 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
TMCO3-209ENST00000619336 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
TMCO3-209ENST00000619336 TRIM41Q8WV44 630 aa28.49■■■□□ 2.15
TMCO3-209ENST00000619336 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
TMCO3-209ENST00000619336 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
TMCO3-209ENST00000619336 WDR62O43379 1518 aa28.4■■■□□ 2.14
TMCO3-209ENST00000619336 WIZO95785 1651 aa28.38■■■□□ 2.13
TMCO3-209ENST00000619336 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
TMCO3-209ENST00000619336 FANCD2Q9BXW9 1451 aa28.2■■■□□ 2.1
TMCO3-209ENST00000619336 CFTRP13569 1480 aa28.08■■■□□ 2.09
TMCO3-209ENST00000619336 OSCARQ8IYS5 282 aa28.03■■■□□ 2.08
TMCO3-209ENST00000619336 URB2Q14146 1524 aaKnown RBP28.01■■■□□ 2.07
TMCO3-209ENST00000619336 TOP2AP11388 1531 aaKnown RBP27.96■■■□□ 2.07
TMCO3-209ENST00000619336 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.07
TMCO3-209ENST00000619336 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
TMCO3-209ENST00000619336 RIMBP3CA6NJZ7 1639 aa27.79■■■□□ 2.04
TMCO3-209ENST00000619336 RIMBP3BA6NNM3 1639 aa27.79■■■□□ 2.04
TMCO3-209ENST00000619336 RIMBP3Q9UFD9 1639 aa27.79■■■□□ 2.04
TMCO3-209ENST00000619336 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
TMCO3-209ENST00000619336 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
TMCO3-209ENST00000619336 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
TMCO3-209ENST00000619336 ARHGEF11O15085 1522 aa27.63■■■□□ 2.01
TMCO3-209ENST00000619336 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
TMCO3-209ENST00000619336 EIF4G3O43432 1585 aaKnown RBP27.57■■■□□ 2
TMCO3-209ENST00000619336 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
TMCO3-209ENST00000619336 ABCC8Q09428 1581 aa27.48■■□□□ 1.99
TMCO3-209ENST00000619336 CHD1O14646 1710 aa27.47■■□□□ 1.99
TMCO3-209ENST00000619336 CYB5RLQ6IPT4 315 aa27.44■■□□□ 1.98
TMCO3-209ENST00000619336 TARBP1Q13395 1621 aaKnown RBP27.42■■□□□ 1.98
TMCO3-209ENST00000619336 AQRO60306 1485 aaKnown RBP eCLIP27.42■■□□□ 1.98
TMCO3-209ENST00000619336 ARAP1Q96P48 1450 aa27.34■■□□□ 1.97
TMCO3-209ENST00000619336 FBLN2P98095 1184 aa27.32■■□□□ 1.96
TMCO3-209ENST00000619336 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
TMCO3-209ENST00000619336 TRHP20396 242 aaPredicted RBP27.28■■□□□ 1.96
TMCO3-209ENST00000619336 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
TMCO3-209ENST00000619336 TDRD9Q8NDG6 1382 aaKnown RBP27.19■■□□□ 1.94
TMCO3-209ENST00000619336 SOGA1O94964 1423 aa27.16■■□□□ 1.94
TMCO3-209ENST00000619336 SNAPC4Q5SXM2 1469 aa27.14■■□□□ 1.94
TMCO3-209ENST00000619336 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
TMCO3-209ENST00000619336 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
TMCO3-209ENST00000619336 WDR97A6NE52 1622 aa27.06■■□□□ 1.92
TMCO3-209ENST00000619336 SYNJ1O43426 1573 aa27.04■■□□□ 1.92
TMCO3-209ENST00000619336 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
TMCO3-209ENST00000619336 CUX1P39880 1505 aa27.01■■□□□ 1.91
TMCO3-209ENST00000619336 MAGI1Q96QZ7 1491 aaPredicted RBP27.01■■□□□ 1.91
TMCO3-209ENST00000619336 GRIN2BQ13224 1484 aa26.98■■□□□ 1.91
TMCO3-209ENST00000619336 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
TMCO3-209ENST00000619336 PBRM1Q86U86 1689 aa26.9■■□□□ 1.9
TMCO3-209ENST00000619336 GAPVD1Q14C86 1478 aa26.83■■□□□ 1.89
TMCO3-209ENST00000619336 AEBP2Q6ZN18 517 aaPredicted RBP26.78■■□□□ 1.88
TMCO3-209ENST00000619336 ABCA5Q8WWZ7 1642 aa26.76■■□□□ 1.87
TMCO3-209ENST00000619336 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
TMCO3-209ENST00000619336 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
TMCO3-209ENST00000619336 GRIN2AQ12879 1464 aa26.64■■□□□ 1.86
TMCO3-209ENST00000619336 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
TMCO3-209ENST00000619336 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
TMCO3-209ENST00000619336 NUP160Q12769 1436 aa26.56■■□□□ 1.84
TMCO3-209ENST00000619336 WRNQ14191 1432 aaPredicted RBP eCLIP26.54■■□□□ 1.84
TMCO3-209ENST00000619336 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
TMCO3-209ENST00000619336 FHAD1B1AJZ9 1412 aa26.47■■□□□ 1.83
TMCO3-209ENST00000619336 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
TMCO3-209ENST00000619336 TOP2BQ02880 1626 aa26.45■■□□□ 1.82
TMCO3-209ENST00000619336 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
TMCO3-209ENST00000619336 KIF13AQ9H1H9 1805 aa26.42■■□□□ 1.82
TMCO3-209ENST00000619336 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
TMCO3-209ENST00000619336 PRG4Q92954 1404 aaPredicted RBP26.34■■□□□ 1.81
TMCO3-209ENST00000619336 JPH4Q96JJ6 628 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms