RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 LCE2AQ5TA79 106 aaPredicted RBP2.21□□□□□ -2.06
ALMS1-206ENST00000613296 KRTAP9-7A8MTY7 169 aa2.2□□□□□ -2.06
ALMS1-206ENST00000613296 APOBP04114 4563 aaKnown RBP2.2□□□□□ -2.06
ALMS1-206ENST00000613296 PCLOQ9Y6V0 5065 aa2.19□□□□□ -2.06
ALMS1-206ENST00000613296 DYNC1H1Q14204 4646 aaKnown RBP2.16□□□□□ -2.06
ALMS1-206ENST00000613296 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
ALMS1-206ENST00000613296 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
ALMS1-206ENST00000613296 SACSQ9NZJ4 4579 aa2.11□□□□□ -2.07
ALMS1-206ENST00000613296 RYR1P21817 5038 aa2.1□□□□□ -2.07
ALMS1-206ENST00000613296 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.07
ALMS1-206ENST00000613296 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
ALMS1-206ENST00000613296 LPAP08519 4548 aa2.07□□□□□ -2.08
ALMS1-206ENST00000613296 DNHD1Q96M86 4753 aa2.07□□□□□ -2.08
ALMS1-206ENST00000613296 KRTAP9-9Q9BYP9 154 aa2.06□□□□□ -2.08
ALMS1-206ENST00000613296 RYR3Q15413 4870 aa2.05□□□□□ -2.08
ALMS1-206ENST00000613296 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
ALMS1-206ENST00000613296 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
ALMS1-206ENST00000613296 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.08
ALMS1-206ENST00000613296 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
ALMS1-206ENST00000613296 SYNE2Q8WXH0 6885 aaKnown RBP1.99□□□□□ -2.09
ALMS1-206ENST00000613296 MYCBP2O75592 4640 aa1.99□□□□□ -2.09
ALMS1-206ENST00000613296 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
ALMS1-206ENST00000613296 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
ALMS1-206ENST00000613296 HERC1Q15751 4861 aa1.97□□□□□ -2.09
ALMS1-206ENST00000613296 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
ALMS1-206ENST00000613296 KRTAP4-12Q9BQ66 201 aa1.96□□□□□ -2.1
ALMS1-206ENST00000613296 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
ALMS1-206ENST00000613296 HERC2O95714 4834 aa1.95□□□□□ -2.1
ALMS1-206ENST00000613296 MUC17Q685J3 4493 aa1.93□□□□□ -2.1
ALMS1-206ENST00000613296 KRTAP4-6Q9BYQ5 205 aa1.92□□□□□ -2.1
ALMS1-206ENST00000613296 EPPK1P58107 5090 aaKnown RBP1.9□□□□□ -2.11
ALMS1-206ENST00000613296 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
ALMS1-206ENST00000613296 HYDINQ4G0P3 5121 aa1.88□□□□□ -2.11
ALMS1-206ENST00000613296 LRP2P98164 4655 aa1.87□□□□□ -2.11
ALMS1-206ENST00000613296 KMT2CQ8NEZ4 4911 aaKnown RBP1.83□□□□□ -2.12
ALMS1-206ENST00000613296 MUC2Q02817 5179 aa1.74□□□□□ -2.13
ALMS1-206ENST00000613296 FSIP2Q5CZC0 6907 aa1.73□□□□□ -2.13
ALMS1-206ENST00000613296 BIRC6Q9NR09 4857 aa1.73□□□□□ -2.13
ALMS1-206ENST00000613296 RYR2Q92736 4967 aa1.71□□□□□ -2.14
ALMS1-206ENST00000613296 KIAA1109Q2LD37 5005 aa1.61□□□□□ -2.15
ALMS1-206ENST00000613296 HMCN2Q8NDA2 5059 aa1.61□□□□□ -2.15
ALMS1-206ENST00000613296 ABCA13Q86UQ4 5058 aa1.6□□□□□ -2.15
ALMS1-206ENST00000613296 KRTAP5-9P26371 169 aa1.58□□□□□ -2.16
ALMS1-206ENST00000613296 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
ALMS1-206ENST00000613296 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
ALMS1-206ENST00000613296 KRTAP5-5Q701N2 237 aaPredicted RBP1.48□□□□□ -2.17
ALMS1-206ENST00000613296 UBR4Q5T4S7 5183 aa1.48□□□□□ -2.17
ALMS1-206ENST00000613296 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
ALMS1-206ENST00000613296 KRTAP5-4Q6L8H1 288 aa1.46□□□□□ -2.18
ALMS1-206ENST00000613296 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
ALMS1-206ENST00000613296 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
ALMS1-206ENST00000613296 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
ALMS1-206ENST00000613296 USH2AO75445 5202 aa1.4□□□□□ -2.18
ALMS1-206ENST00000613296 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
ALMS1-206ENST00000613296 NEBP20929 6669 aa1.35□□□□□ -2.19
ALMS1-206ENST00000613296 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
ALMS1-206ENST00000613296 OBSCNQ5VST9 7968 aa1.29□□□□□ -2.2
ALMS1-206ENST00000613296 KRTAP5-3Q6L8H2 238 aa1.28□□□□□ -2.2
ALMS1-206ENST00000613296 KMT2DO14686 5537 aa1.27□□□□□ -2.21
ALMS1-206ENST00000613296 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
ALMS1-206ENST00000613296 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
ALMS1-206ENST00000613296 GPR98Q8WXG9 6306 aa1.22□□□□□ -2.21
ALMS1-206ENST00000613296 SSPOA2VEC9 5147 aa1.19□□□□□ -2.22
ALMS1-206ENST00000613296 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
ALMS1-206ENST00000613296 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
ALMS1-206ENST00000613296 KRTAP5-2Q701N4 177 aa1.16□□□□□ -2.22
ALMS1-206ENST00000613296 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.24
ALMS1-206ENST00000613296 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
ALMS1-206ENST00000613296 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
ALMS1-206ENST00000613296 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.24
ALMS1-206ENST00000613296 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
ALMS1-206ENST00000613296 HMCN1Q96RW7 5635 aa1□□□□□ -2.25
ALMS1-206ENST00000613296 KRTAP5-11Q6L8G4 156 aa0.99□□□□□ -2.25
ALMS1-206ENST00000613296 KRTAP21-2Q3LI59 83 aa0.9□□□□□ -2.27
ALMS1-206ENST00000613296 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
ALMS1-206ENST00000613296 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.82□□□□□ -2.28
ALMS1-206ENST00000613296 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms