RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LPAP08519 4548 aa0.93□□□□□ -2.26
LINC00397-202ENST00000606785 MAST4O15021 2626 aa0.93□□□□□ -2.26
LINC00397-202ENST00000606785 DNAH14Q0VDD8 3507 aa0.93□□□□□ -2.26
LINC00397-202ENST00000606785 SPRR2DP22532 72 aa0.92□□□□□ -2.26
LINC00397-202ENST00000606785 SPRR2BP35325 72 aa0.92□□□□□ -2.26
LINC00397-202ENST00000606785 VPS13CQ709C8 3753 aa0.92□□□□□ -2.26
LINC00397-202ENST00000606785 WDFY3Q8IZQ1 3526 aa0.92□□□□□ -2.26
LINC00397-202ENST00000606785 IGSF10Q6WRI0 2623 aa0.91□□□□□ -2.26
LINC00397-202ENST00000606785 DYNC1H1Q14204 4646 aaKnown RBP0.91□□□□□ -2.26
LINC00397-202ENST00000606785 PKHD1P08F94 4074 aa0.9□□□□□ -2.26
LINC00397-202ENST00000606785 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
LINC00397-202ENST00000606785 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
LINC00397-202ENST00000606785 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
LINC00397-202ENST00000606785 SPRR2AP35326 72 aa0.89□□□□□ -2.27
LINC00397-202ENST00000606785 GPR98Q8WXG9 6306 aa0.89□□□□□ -2.27
LINC00397-202ENST00000606785 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
LINC00397-202ENST00000606785 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
LINC00397-202ENST00000606785 SPRR2GQ9BYE4 73 aa0.87□□□□□ -2.27
LINC00397-202ENST00000606785 FAT1Q14517 4588 aa0.87□□□□□ -2.27
LINC00397-202ENST00000606785 MT1EP04732 61 aa0.85□□□□□ -2.27
LINC00397-202ENST00000606785 MUC17Q685J3 4493 aa0.84□□□□□ -2.28
LINC00397-202ENST00000606785 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
LINC00397-202ENST00000606785 SPRR2EP22531 72 aa0.82□□□□□ -2.28
LINC00397-202ENST00000606785 STARD9Q9P2P6 4700 aa0.82□□□□□ -2.28
LINC00397-202ENST00000606785 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
LINC00397-202ENST00000606785 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
LINC00397-202ENST00000606785 MT1LQ93083 61 aa0.81□□□□□ -2.28
LINC00397-202ENST00000606785 CDH23Q9H251 3354 aa0.78□□□□□ -2.28
LINC00397-202ENST00000606785 MT1HP80294 61 aa0.77□□□□□ -2.29
LINC00397-202ENST00000606785 MT1XP80297 61 aa0.76□□□□□ -2.29
LINC00397-202ENST00000606785 KRTAP19-8Q3LI54 63 aa0.76□□□□□ -2.29
LINC00397-202ENST00000606785 LRP1BQ9NZR2 4599 aa0.75□□□□□ -2.29
LINC00397-202ENST00000606785 HERC1Q15751 4861 aa0.75□□□□□ -2.29
LINC00397-202ENST00000606785 KRTAP19-2Q3LHN2 52 aa0.7□□□□□ -2.3
LINC00397-202ENST00000606785 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
LINC00397-202ENST00000606785 LRP2P98164 4655 aa0.69□□□□□ -2.3
LINC00397-202ENST00000606785 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
LINC00397-202ENST00000606785 MT1GP13640 62 aa0.65□□□□□ -2.31
LINC00397-202ENST00000606785 MT1BP07438 61 aa0.64□□□□□ -2.31
LINC00397-202ENST00000606785 MACF1Q9UPN3 7388 aaKnown RBP0.63□□□□□ -2.31
LINC00397-202ENST00000606785 MUC2Q02817 5179 aa0.62□□□□□ -2.31
LINC00397-202ENST00000606785 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
LINC00397-202ENST00000606785 MT2AP02795 61 aa0.59□□□□□ -2.31
LINC00397-202ENST00000606785 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
LINC00397-202ENST00000606785 MT1MQ8N339 61 aa0.57□□□□□ -2.32
LINC00397-202ENST00000606785 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
LINC00397-202ENST00000606785 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
LINC00397-202ENST00000606785 KMT2CQ8NEZ4 4911 aaKnown RBP0.53□□□□□ -2.32
LINC00397-202ENST00000606785 USH2AO75445 5202 aa0.53□□□□□ -2.33
LINC00397-202ENST00000606785 DSTQ03001 7570 aaKnown RBP0.52□□□□□ -2.33
LINC00397-202ENST00000606785 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
LINC00397-202ENST00000606785 SSPOA2VEC9 5147 aa0.51□□□□□ -2.33
LINC00397-202ENST00000606785 DNHD1Q96M86 4753 aa0.51□□□□□ -2.33
LINC00397-202ENST00000606785 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
LINC00397-202ENST00000606785 MT1FP04733 61 aa0.5□□□□□ -2.33
LINC00397-202ENST00000606785 MT1HL1P0DM35 61 aa0.5□□□□□ -2.33
LINC00397-202ENST00000606785 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
LINC00397-202ENST00000606785 HYDINQ4G0P3 5121 aa0.49□□□□□ -2.33
LINC00397-202ENST00000606785 FSIP2Q5CZC0 6907 aa0.49□□□□□ -2.33
LINC00397-202ENST00000606785 RYR3Q15413 4870 aa0.49□□□□□ -2.33
LINC00397-202ENST00000606785 UBR4Q5T4S7 5183 aa0.48□□□□□ -2.33
LINC00397-202ENST00000606785 HERC2O95714 4834 aa0.48□□□□□ -2.33
LINC00397-202ENST00000606785 PCLOQ9Y6V0 5065 aa0.47□□□□□ -2.33
LINC00397-202ENST00000606785 NEBP20929 6669 aa0.46□□□□□ -2.34
LINC00397-202ENST00000606785 BIRC6Q9NR09 4857 aa0.45□□□□□ -2.34
LINC00397-202ENST00000606785 RYR1P21817 5038 aa0.41□□□□□ -2.34
LINC00397-202ENST00000606785 KMT2DO14686 5537 aa0.4□□□□□ -2.34
LINC00397-202ENST00000606785 KIAA1109Q2LD37 5005 aa0.4□□□□□ -2.35
LINC00397-202ENST00000606785 RNF213Q63HN8 5207 aa0.38□□□□□ -2.35
LINC00397-202ENST00000606785 RYR2Q92736 4967 aa0.31□□□□□ -2.36
LINC00397-202ENST00000606785 KRTAP20-1Q3LI63 56 aa0.3□□□□□ -2.36
LINC00397-202ENST00000606785 EPPK1P58107 5090 aaKnown RBP0.26□□□□□ -2.37
LINC00397-202ENST00000606785 MUC12Q9UKN1 5478 aa0.25□□□□□ -2.37
LINC00397-202ENST00000606785 ABCA13Q86UQ4 5058 aa0.24□□□□□ -2.37
LINC00397-202ENST00000606785 MT4P47944 62 aa0.2□□□□□ -2.38
LINC00397-202ENST00000606785 KRTAP20-2Q3LI61 65 aa0.17□□□□□ -2.38
LINC00397-202ENST00000606785 KRTAP19-6Q3LI70 58 aa0.14□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 59.7 ms