RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
SAFB2-202ENST00000585449 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
SAFB2-202ENST00000585449 PSPHP1O15172 72 aa3.69□□□□□ -1.82
SAFB2-202ENST00000585449 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
SAFB2-202ENST00000585449 PCP4P48539 62 aa3.67□□□□□ -1.82
SAFB2-202ENST00000585449 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
SAFB2-202ENST00000585449 Q1T7F1 81 aa3.65□□□□□ -1.83
SAFB2-202ENST00000585449 V9GYY9 64 aa3.65□□□□□ -1.83
SAFB2-202ENST00000585449 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
SAFB2-202ENST00000585449 K7ERS5 55 aa3.62□□□□□ -1.83
SAFB2-202ENST00000585449 MT4P47944 62 aa3.62□□□□□ -1.83
SAFB2-202ENST00000585449 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
SAFB2-202ENST00000585449 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
SAFB2-202ENST00000585449 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
SAFB2-202ENST00000585449 A6NED7 52 aa3.54□□□□□ -1.84
SAFB2-202ENST00000585449 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
SAFB2-202ENST00000585449 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
SAFB2-202ENST00000585449 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
SAFB2-202ENST00000585449 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
SAFB2-202ENST00000585449 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
SAFB2-202ENST00000585449 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
SAFB2-202ENST00000585449 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
SAFB2-202ENST00000585449 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
SAFB2-202ENST00000585449 SVIPQ8NHG7 77 aa3.44□□□□□ -1.86
SAFB2-202ENST00000585449 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
SAFB2-202ENST00000585449 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
SAFB2-202ENST00000585449 ROMO1P60602 79 aa3.4□□□□□ -1.87
SAFB2-202ENST00000585449 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
SAFB2-202ENST00000585449 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
SAFB2-202ENST00000585449 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
SAFB2-202ENST00000585449 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
SAFB2-202ENST00000585449 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
SAFB2-202ENST00000585449 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
SAFB2-202ENST00000585449 H3BS24 57 aa3.31□□□□□ -1.88
SAFB2-202ENST00000585449 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
SAFB2-202ENST00000585449 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
SAFB2-202ENST00000585449 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
SAFB2-202ENST00000585449 MT1AP04731 61 aa3.22□□□□□ -1.89
SAFB2-202ENST00000585449 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
SAFB2-202ENST00000585449 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
SAFB2-202ENST00000585449 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
SAFB2-202ENST00000585449 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
SAFB2-202ENST00000585449 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
SAFB2-202ENST00000585449 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SAFB2-202ENST00000585449 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
SAFB2-202ENST00000585449 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
SAFB2-202ENST00000585449 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
SAFB2-202ENST00000585449 MT3P25713 68 aa2.95□□□□□ -1.94
SAFB2-202ENST00000585449 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
SAFB2-202ENST00000585449 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
SAFB2-202ENST00000585449 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
SAFB2-202ENST00000585449 PRAC1Q96KF2 57 aa2.8□□□□□ -1.96
SAFB2-202ENST00000585449 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
SAFB2-202ENST00000585449 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
SAFB2-202ENST00000585449 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
SAFB2-202ENST00000585449 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
SAFB2-202ENST00000585449 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
SAFB2-202ENST00000585449 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.97
SAFB2-202ENST00000585449 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
SAFB2-202ENST00000585449 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
SAFB2-202ENST00000585449 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
SAFB2-202ENST00000585449 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
SAFB2-202ENST00000585449 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
SAFB2-202ENST00000585449 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
SAFB2-202ENST00000585449 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
SAFB2-202ENST00000585449 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
SAFB2-202ENST00000585449 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
SAFB2-202ENST00000585449 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
SAFB2-202ENST00000585449 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
SAFB2-202ENST00000585449 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
SAFB2-202ENST00000585449 NDUFAF8A1L188 74 aa2.09□□□□□ -2.07
SAFB2-202ENST00000585449 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SAFB2-202ENST00000585449 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
SAFB2-202ENST00000585449 INE1O15225 51 aa1.83□□□□□ -2.12
SAFB2-202ENST00000585449 PRM1P04553 51 aa1.76□□□□□ -2.13
SAFB2-202ENST00000585449 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
SAFB2-202ENST00000585449 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
SAFB2-202ENST00000585449 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms