RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 KRTAP19-2Q3LHN2 52 aa2.07□□□□□ -2.08
SMAD4-203ENST00000585448 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SMAD4-203ENST00000585448 MT1HL1P0DM35 61 aa2.04□□□□□ -2.08
SMAD4-203ENST00000585448 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
SMAD4-203ENST00000585448 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
SMAD4-203ENST00000585448 HERC1Q15751 4861 aa1.99□□□□□ -2.09
SMAD4-203ENST00000585448 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
SMAD4-203ENST00000585448 KRTAP19-8Q3LI54 63 aa1.98□□□□□ -2.09
SMAD4-203ENST00000585448 KRTAP4-1Q9BYQ7 146 aa1.97□□□□□ -2.09
SMAD4-203ENST00000585448 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
SMAD4-203ENST00000585448 LPAP08519 4548 aa1.94□□□□□ -2.1
SMAD4-203ENST00000585448 MT1XP80297 61 aa1.94□□□□□ -2.1
SMAD4-203ENST00000585448 MUC17Q685J3 4493 aa1.88□□□□□ -2.11
SMAD4-203ENST00000585448 DNHD1Q96M86 4753 aa1.87□□□□□ -2.11
SMAD4-203ENST00000585448 PRM1P04553 51 aa1.84□□□□□ -2.11
SMAD4-203ENST00000585448 MT1BP07438 61 aa1.84□□□□□ -2.11
SMAD4-203ENST00000585448 MT1AP04731 61 aa1.82□□□□□ -2.12
SMAD4-203ENST00000585448 MT1EP04732 61 aa1.81□□□□□ -2.12
SMAD4-203ENST00000585448 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
SMAD4-203ENST00000585448 LRP2P98164 4655 aa1.8□□□□□ -2.12
SMAD4-203ENST00000585448 MT1LQ93083 61 aa1.78□□□□□ -2.12
SMAD4-203ENST00000585448 MT2AP02795 61 aa1.77□□□□□ -2.13
SMAD4-203ENST00000585448 MT1FP04733 61 aa1.76□□□□□ -2.13
SMAD4-203ENST00000585448 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
SMAD4-203ENST00000585448 HYDINQ4G0P3 5121 aa1.69□□□□□ -2.14
SMAD4-203ENST00000585448 KMT2CQ8NEZ4 4911 aaKnown RBP1.67□□□□□ -2.14
SMAD4-203ENST00000585448 MT1HP80294 61 aa1.66□□□□□ -2.14
SMAD4-203ENST00000585448 HMCN2Q8NDA2 5059 aa1.65□□□□□ -2.15
SMAD4-203ENST00000585448 KRTAP21-3Q3LHN1 58 aa1.63□□□□□ -2.15
SMAD4-203ENST00000585448 KRTAP6-2Q3LI66 62 aa1.63□□□□□ -2.15
SMAD4-203ENST00000585448 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
SMAD4-203ENST00000585448 RYR2Q92736 4967 aa1.63□□□□□ -2.15
SMAD4-203ENST00000585448 MT1GP13640 62 aa1.6□□□□□ -2.15
SMAD4-203ENST00000585448 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.15
SMAD4-203ENST00000585448 MUC2Q02817 5179 aa1.59□□□□□ -2.15
SMAD4-203ENST00000585448 SPRR2AP35326 72 aa1.59□□□□□ -2.15
SMAD4-203ENST00000585448 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
SMAD4-203ENST00000585448 SPRR2BP35325 72 aa1.56□□□□□ -2.16
SMAD4-203ENST00000585448 RYR1P21817 5038 aa1.56□□□□□ -2.16
SMAD4-203ENST00000585448 HERC2O95714 4834 aa1.55□□□□□ -2.16
SMAD4-203ENST00000585448 RYR3Q15413 4870 aa1.55□□□□□ -2.16
SMAD4-203ENST00000585448 MT1MQ8N339 61 aa1.53□□□□□ -2.16
SMAD4-203ENST00000585448 SPRR2DP22532 72 aa1.52□□□□□ -2.17
SMAD4-203ENST00000585448 SPRR2EP22531 72 aa1.51□□□□□ -2.17
SMAD4-203ENST00000585448 EPPK1P58107 5090 aaKnown RBP1.5□□□□□ -2.17
SMAD4-203ENST00000585448 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
SMAD4-203ENST00000585448 BIRC6Q9NR09 4857 aa1.46□□□□□ -2.18
SMAD4-203ENST00000585448 UBR4Q5T4S7 5183 aa1.44□□□□□ -2.18
SMAD4-203ENST00000585448 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
SMAD4-203ENST00000585448 KIAA1109Q2LD37 5005 aa1.43□□□□□ -2.18
SMAD4-203ENST00000585448 ABCA13Q86UQ4 5058 aa1.42□□□□□ -2.18
SMAD4-203ENST00000585448 PCLOQ9Y6V0 5065 aa1.41□□□□□ -2.18
SMAD4-203ENST00000585448 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
SMAD4-203ENST00000585448 RNF213Q63HN8 5207 aa1.28□□□□□ -2.21
SMAD4-203ENST00000585448 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
SMAD4-203ENST00000585448 USH2AO75445 5202 aa1.25□□□□□ -2.21
SMAD4-203ENST00000585448 KRTAP19-6Q3LI70 58 aa1.21□□□□□ -2.22
SMAD4-203ENST00000585448 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
SMAD4-203ENST00000585448 FAT4Q6V0I7 4981 aa1.19□□□□□ -2.22
SMAD4-203ENST00000585448 KMT2DO14686 5537 aa1.16□□□□□ -2.22
SMAD4-203ENST00000585448 SSPOA2VEC9 5147 aa1.14□□□□□ -2.23
SMAD4-203ENST00000585448 FSIP2Q5CZC0 6907 aa1.09□□□□□ -2.23
SMAD4-203ENST00000585448 MDN1Q9NU22 5596 aa1.03□□□□□ -2.25
SMAD4-203ENST00000585448 SYNE2Q8WXH0 6885 aaKnown RBP1.01□□□□□ -2.25
SMAD4-203ENST00000585448 MACF1Q9UPN3 7388 aaKnown RBP0.98□□□□□ -2.25
SMAD4-203ENST00000585448 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
SMAD4-203ENST00000585448 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
SMAD4-203ENST00000585448 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
SMAD4-203ENST00000585448 NEBP20929 6669 aa0.93□□□□□ -2.26
SMAD4-203ENST00000585448 MUC12Q9UKN1 5478 aa0.92□□□□□ -2.26
SMAD4-203ENST00000585448 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
SMAD4-203ENST00000585448 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
SMAD4-203ENST00000585448 GPR98Q8WXG9 6306 aa0.82□□□□□ -2.28
SMAD4-203ENST00000585448 KRTAP20-1Q3LI63 56 aa0.74□□□□□ -2.29
SMAD4-203ENST00000585448 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
SMAD4-203ENST00000585448 MT4P47944 62 aa0.69□□□□□ -2.3
SMAD4-203ENST00000585448 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
SMAD4-203ENST00000585448 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 980.3 ms