RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.62
CSNK1D-219ENST00000581660 LINC01558Q9Y6Z2 57 aa4.94□□□□□ -1.62
CSNK1D-219ENST00000581660 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
CSNK1D-219ENST00000581660 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
CSNK1D-219ENST00000581660 V9GYY9 64 aa4.89□□□□□ -1.63
CSNK1D-219ENST00000581660 A0A0D9SG42 100 aa4.88□□□□□ -1.63
CSNK1D-219ENST00000581660 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
CSNK1D-219ENST00000581660 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
CSNK1D-219ENST00000581660 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
CSNK1D-219ENST00000581660 UQCR11O14957 56 aa4.84□□□□□ -1.63
CSNK1D-219ENST00000581660 MT1LQ93083 61 aa4.84□□□□□ -1.63
CSNK1D-219ENST00000581660 MUC5ACP98088 5654 aa4.84□□□□□ -1.64
CSNK1D-219ENST00000581660 KRTAP12-1P59990 96 aa4.81□□□□□ -1.64
CSNK1D-219ENST00000581660 MUC5BQ9HC84 5762 aaPredicted RBP4.81□□□□□ -1.64
CSNK1D-219ENST00000581660 Q1T7F1 81 aa4.76□□□□□ -1.65
CSNK1D-219ENST00000581660 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
CSNK1D-219ENST00000581660 A8MU10 97 aa4.72□□□□□ -1.65
CSNK1D-219ENST00000581660 K7ERS5 55 aa4.71□□□□□ -1.66
CSNK1D-219ENST00000581660 PCP4P48539 62 aa4.7□□□□□ -1.66
CSNK1D-219ENST00000581660 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
CSNK1D-219ENST00000581660 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
CSNK1D-219ENST00000581660 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
CSNK1D-219ENST00000581660 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
CSNK1D-219ENST00000581660 TNP1P09430 55 aa4.66□□□□□ -1.66
CSNK1D-219ENST00000581660 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
CSNK1D-219ENST00000581660 PSPHP1O15172 72 aa4.62□□□□□ -1.67
CSNK1D-219ENST00000581660 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
CSNK1D-219ENST00000581660 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
CSNK1D-219ENST00000581660 A6NED7 52 aa4.55□□□□□ -1.68
CSNK1D-219ENST00000581660 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
CSNK1D-219ENST00000581660 KRTAP5-8O75690 187 aa4.52□□□□□ -1.69
CSNK1D-219ENST00000581660 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
CSNK1D-219ENST00000581660 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
CSNK1D-219ENST00000581660 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
CSNK1D-219ENST00000581660 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
CSNK1D-219ENST00000581660 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
CSNK1D-219ENST00000581660 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
CSNK1D-219ENST00000581660 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
CSNK1D-219ENST00000581660 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
CSNK1D-219ENST00000581660 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
CSNK1D-219ENST00000581660 ROMO1P60602 79 aa4.31□□□□□ -1.72
CSNK1D-219ENST00000581660 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
CSNK1D-219ENST00000581660 MT1AP04731 61 aa4.12□□□□□ -1.75
CSNK1D-219ENST00000581660 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
CSNK1D-219ENST00000581660 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
CSNK1D-219ENST00000581660 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
CSNK1D-219ENST00000581660 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
CSNK1D-219ENST00000581660 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
CSNK1D-219ENST00000581660 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
CSNK1D-219ENST00000581660 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
CSNK1D-219ENST00000581660 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
CSNK1D-219ENST00000581660 MT3P25713 68 aa3.79□□□□□ -1.8
CSNK1D-219ENST00000581660 PRO0628Q9UI54 55 aa3.77□□□□□ -1.81
CSNK1D-219ENST00000581660 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
CSNK1D-219ENST00000581660 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
CSNK1D-219ENST00000581660 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
CSNK1D-219ENST00000581660 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
CSNK1D-219ENST00000581660 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
CSNK1D-219ENST00000581660 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
CSNK1D-219ENST00000581660 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
CSNK1D-219ENST00000581660 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
CSNK1D-219ENST00000581660 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
CSNK1D-219ENST00000581660 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
CSNK1D-219ENST00000581660 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CSNK1D-219ENST00000581660 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
CSNK1D-219ENST00000581660 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
CSNK1D-219ENST00000581660 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
CSNK1D-219ENST00000581660 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CSNK1D-219ENST00000581660 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
CSNK1D-219ENST00000581660 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
CSNK1D-219ENST00000581660 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
CSNK1D-219ENST00000581660 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
CSNK1D-219ENST00000581660 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
CSNK1D-219ENST00000581660 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
CSNK1D-219ENST00000581660 INE1O15225 51 aa2.27□□□□□ -2.05
CSNK1D-219ENST00000581660 H3BS24 57 aa2.21□□□□□ -2.06
CSNK1D-219ENST00000581660 PRM1P04553 51 aa2.14□□□□□ -2.07
CSNK1D-219ENST00000581660 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 117 ms