RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
CALCOCO2-227ENST00000575560 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
CALCOCO2-227ENST00000575560 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
CALCOCO2-227ENST00000575560 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
CALCOCO2-227ENST00000575560 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
CALCOCO2-227ENST00000575560 MT1MQ8N339 61 aa3.58□□□□□ -1.84
CALCOCO2-227ENST00000575560 SPANXA2-OT1Q8N9U9 137 aa3.57□□□□□ -1.84
CALCOCO2-227ENST00000575560 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
CALCOCO2-227ENST00000575560 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
CALCOCO2-227ENST00000575560 Q1T7F1 81 aa3.55□□□□□ -1.84
CALCOCO2-227ENST00000575560 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
CALCOCO2-227ENST00000575560 A0A0D9SG42 100 aa3.52□□□□□ -1.85
CALCOCO2-227ENST00000575560 ACYP2P14621 99 aa3.52□□□□□ -1.85
CALCOCO2-227ENST00000575560 SPTSSBQ8NFR3 76 aa3.52□□□□□ -1.85
CALCOCO2-227ENST00000575560 MT1LQ93083 61 aa3.51□□□□□ -1.85
CALCOCO2-227ENST00000575560 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
CALCOCO2-227ENST00000575560 CHKB-CPT1BH3BT56 60 aa3.46□□□□□ -1.86
CALCOCO2-227ENST00000575560 PSPHP1O15172 72 aa3.46□□□□□ -1.86
CALCOCO2-227ENST00000575560 COA5Q86WW8 74 aa3.46□□□□□ -1.86
CALCOCO2-227ENST00000575560 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
CALCOCO2-227ENST00000575560 A6NED7 52 aa3.44□□□□□ -1.86
CALCOCO2-227ENST00000575560 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
CALCOCO2-227ENST00000575560 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
CALCOCO2-227ENST00000575560 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
CALCOCO2-227ENST00000575560 LINC01558Q9Y6Z2 57 aa3.4□□□□□ -1.87
CALCOCO2-227ENST00000575560 CDC42SE1Q9NRR8 79 aa3.39□□□□□ -1.87
CALCOCO2-227ENST00000575560 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
CALCOCO2-227ENST00000575560 SEC61GP60059 68 aa3.36□□□□□ -1.87
CALCOCO2-227ENST00000575560 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
CALCOCO2-227ENST00000575560 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
CALCOCO2-227ENST00000575560 A0A1B0GU69 56 aa3.32□□□□□ -1.88
CALCOCO2-227ENST00000575560 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
CALCOCO2-227ENST00000575560 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
CALCOCO2-227ENST00000575560 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
CALCOCO2-227ENST00000575560 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
CALCOCO2-227ENST00000575560 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
CALCOCO2-227ENST00000575560 UQCR11O14957 56 aa3.27□□□□□ -1.89
CALCOCO2-227ENST00000575560 MT3P25713 68 aa3.27□□□□□ -1.89
CALCOCO2-227ENST00000575560 MIR22HGQ0VDD5 57 aa3.24□□□□□ -1.89
CALCOCO2-227ENST00000575560 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
CALCOCO2-227ENST00000575560 A0A1B0GU33 70 aa3.22□□□□□ -1.89
CALCOCO2-227ENST00000575560 TNP1P09430 55 aa3.22□□□□□ -1.89
CALCOCO2-227ENST00000575560 A8MU10 97 aa3.19□□□□□ -1.9
CALCOCO2-227ENST00000575560 K7ERS5 55 aa3.19□□□□□ -1.9
CALCOCO2-227ENST00000575560 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
CALCOCO2-227ENST00000575560 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-227ENST00000575560 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
CALCOCO2-227ENST00000575560 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
CALCOCO2-227ENST00000575560 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CALCOCO2-227ENST00000575560 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
CALCOCO2-227ENST00000575560 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-227ENST00000575560 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
CALCOCO2-227ENST00000575560 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
CALCOCO2-227ENST00000575560 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CALCOCO2-227ENST00000575560 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
CALCOCO2-227ENST00000575560 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
CALCOCO2-227ENST00000575560 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
CALCOCO2-227ENST00000575560 MT1AP04731 61 aa2.98□□□□□ -1.93
CALCOCO2-227ENST00000575560 ROMO1P60602 79 aa2.96□□□□□ -1.94
CALCOCO2-227ENST00000575560 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
CALCOCO2-227ENST00000575560 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
CALCOCO2-227ENST00000575560 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
CALCOCO2-227ENST00000575560 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
CALCOCO2-227ENST00000575560 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
CALCOCO2-227ENST00000575560 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
CALCOCO2-227ENST00000575560 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
CALCOCO2-227ENST00000575560 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
CALCOCO2-227ENST00000575560 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CALCOCO2-227ENST00000575560 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
CALCOCO2-227ENST00000575560 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
CALCOCO2-227ENST00000575560 INE1O15225 51 aa2.29□□□□□ -2.04
CALCOCO2-227ENST00000575560 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
CALCOCO2-227ENST00000575560 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
CALCOCO2-227ENST00000575560 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CALCOCO2-227ENST00000575560 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CALCOCO2-227ENST00000575560 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
CALCOCO2-227ENST00000575560 PRM1P04553 51 aa1.53□□□□□ -2.16
CALCOCO2-227ENST00000575560 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 16.2 ms