RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
CPNE7-208ENST00000566398 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.35
CPNE7-208ENST00000566398 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
CPNE7-208ENST00000566398 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
CPNE7-208ENST00000566398 V9GYY9 64 aa6.54□□□□□ -1.36
CPNE7-208ENST00000566398 K7ERS5 55 aa6.53□□□□□ -1.36
CPNE7-208ENST00000566398 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
CPNE7-208ENST00000566398 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
CPNE7-208ENST00000566398 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
CPNE7-208ENST00000566398 PSPHP1O15172 72 aa6.5□□□□□ -1.37
CPNE7-208ENST00000566398 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
CPNE7-208ENST00000566398 MT4P47944 62 aa6.46□□□□□ -1.38
CPNE7-208ENST00000566398 Q1T7F1 81 aa6.46□□□□□ -1.38
CPNE7-208ENST00000566398 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
CPNE7-208ENST00000566398 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
CPNE7-208ENST00000566398 A6NED7 52 aa6.3□□□□□ -1.4
CPNE7-208ENST00000566398 AHNAK2Q8IVF2 5795 aa6.27□□□□□ -1.41
CPNE7-208ENST00000566398 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
CPNE7-208ENST00000566398 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
CPNE7-208ENST00000566398 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
CPNE7-208ENST00000566398 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
CPNE7-208ENST00000566398 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
CPNE7-208ENST00000566398 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
CPNE7-208ENST00000566398 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
CPNE7-208ENST00000566398 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
CPNE7-208ENST00000566398 ROMO1P60602 79 aa6.06□□□□□ -1.44
CPNE7-208ENST00000566398 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
CPNE7-208ENST00000566398 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
CPNE7-208ENST00000566398 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
CPNE7-208ENST00000566398 KRTAP5-10Q6L8G5 202 aa6.03□□□□□ -1.44
CPNE7-208ENST00000566398 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
CPNE7-208ENST00000566398 PCP4P48539 62 aa6.01□□□□□ -1.45
CPNE7-208ENST00000566398 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
CPNE7-208ENST00000566398 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
CPNE7-208ENST00000566398 KRTAP5-7Q6L8G8 165 aa5.8□□□□□ -1.48
CPNE7-208ENST00000566398 MT1AP04731 61 aa5.76□□□□□ -1.49
CPNE7-208ENST00000566398 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
CPNE7-208ENST00000566398 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
CPNE7-208ENST00000566398 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
CPNE7-208ENST00000566398 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
CPNE7-208ENST00000566398 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
CPNE7-208ENST00000566398 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
CPNE7-208ENST00000566398 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
CPNE7-208ENST00000566398 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
CPNE7-208ENST00000566398 MT3P25713 68 aa5.27□□□□□ -1.57
CPNE7-208ENST00000566398 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
CPNE7-208ENST00000566398 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
CPNE7-208ENST00000566398 MUC5BQ9HC84 5762 aaPredicted RBP5.16□□□□□ -1.58
CPNE7-208ENST00000566398 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
CPNE7-208ENST00000566398 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
CPNE7-208ENST00000566398 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
CPNE7-208ENST00000566398 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
CPNE7-208ENST00000566398 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
CPNE7-208ENST00000566398 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
CPNE7-208ENST00000566398 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
CPNE7-208ENST00000566398 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
CPNE7-208ENST00000566398 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
CPNE7-208ENST00000566398 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
CPNE7-208ENST00000566398 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
CPNE7-208ENST00000566398 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
CPNE7-208ENST00000566398 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
CPNE7-208ENST00000566398 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CPNE7-208ENST00000566398 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
CPNE7-208ENST00000566398 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CPNE7-208ENST00000566398 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
CPNE7-208ENST00000566398 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CPNE7-208ENST00000566398 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
CPNE7-208ENST00000566398 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
CPNE7-208ENST00000566398 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
CPNE7-208ENST00000566398 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
CPNE7-208ENST00000566398 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
CPNE7-208ENST00000566398 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
CPNE7-208ENST00000566398 PRM1P04553 51 aa3.1□□□□□ -1.91
CPNE7-208ENST00000566398 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
CPNE7-208ENST00000566398 INE1O15225 51 aa2.6□□□□□ -1.99
CPNE7-208ENST00000566398 A0A0A0MQY5 61 aa2.53□□□□□ -2
CPNE7-208ENST00000566398 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
CPNE7-208ENST00000566398 H3BS24 57 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms