RNA–Protein interactions for RNA: ENST00000563705.5

SPSB3-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-203ENST00000563705 LCE1DQ5T752 114 aa7.38□□□□□ -1.23
SPSB3-203ENST00000563705 TMEM258P61165 79 aa7.37□□□□□ -1.23
SPSB3-203ENST00000563705 UQCR11O14957 56 aa7.34□□□□□ -1.23
SPSB3-203ENST00000563705 HMCN1Q96RW7 5635 aa7.32□□□□□ -1.24
SPSB3-203ENST00000563705 KRTAP4-3Q9BYR4 195 aa7.31□□□□□ -1.24
SPSB3-203ENST00000563705 MT4P47944 62 aa7.26□□□□□ -1.25
SPSB3-203ENST00000563705 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
SPSB3-203ENST00000563705 KRTAP5-4Q6L8H1 288 aa7.24□□□□□ -1.25
SPSB3-203ENST00000563705 MIR22HGQ0VDD5 57 aa7.15□□□□□ -1.26
SPSB3-203ENST00000563705 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
SPSB3-203ENST00000563705 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
SPSB3-203ENST00000563705 K7ERS5 55 aa7.06□□□□□ -1.28
SPSB3-203ENST00000563705 AHNAK2Q8IVF2 5795 aa7.06□□□□□ -1.28
SPSB3-203ENST00000563705 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
SPSB3-203ENST00000563705 V9GYY9 64 aa7.01□□□□□ -1.29
SPSB3-203ENST00000563705 PSPHP1O15172 72 aa6.94□□□□□ -1.3
SPSB3-203ENST00000563705 Q1T7F1 81 aa6.93□□□□□ -1.3
SPSB3-203ENST00000563705 KRTAP5-5Q701N2 237 aaPredicted RBP6.93□□□□□ -1.3
SPSB3-203ENST00000563705 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
SPSB3-203ENST00000563705 KRTAP5-10Q6L8G5 202 aa6.9□□□□□ -1.3
SPSB3-203ENST00000563705 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
SPSB3-203ENST00000563705 KRTAP20-2Q3LI61 65 aa6.82□□□□□ -1.32
SPSB3-203ENST00000563705 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
SPSB3-203ENST00000563705 KRTAP12-4P60329 112 aa6.76□□□□□ -1.33
SPSB3-203ENST00000563705 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
SPSB3-203ENST00000563705 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
SPSB3-203ENST00000563705 A6NED7 52 aa6.72□□□□□ -1.33
SPSB3-203ENST00000563705 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
SPSB3-203ENST00000563705 SYNE1Q8NF91 8797 aaKnown RBP6.67□□□□□ -1.34
SPSB3-203ENST00000563705 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
SPSB3-203ENST00000563705 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
SPSB3-203ENST00000563705 KRTAP5-7Q6L8G8 165 aa6.65□□□□□ -1.34
SPSB3-203ENST00000563705 ROMO1P60602 79 aa6.54□□□□□ -1.36
SPSB3-203ENST00000563705 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
SPSB3-203ENST00000563705 MT1AP04731 61 aa6.43□□□□□ -1.38
SPSB3-203ENST00000563705 KRTAP6-1Q3LI64 71 aa6.37□□□□□ -1.39
SPSB3-203ENST00000563705 KRTAP5-2Q701N4 177 aa6.33□□□□□ -1.4
SPSB3-203ENST00000563705 KRTAP9-6A8MVA2 160 aa6.28□□□□□ -1.4
SPSB3-203ENST00000563705 KRTAP4-11Q9BYQ6 195 aa6.24□□□□□ -1.41
SPSB3-203ENST00000563705 PCP4P48539 62 aa6.22□□□□□ -1.41
SPSB3-203ENST00000563705 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
SPSB3-203ENST00000563705 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
SPSB3-203ENST00000563705 KRTAP5-8O75690 187 aa6.03□□□□□ -1.44
SPSB3-203ENST00000563705 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
SPSB3-203ENST00000563705 MT3P25713 68 aa5.89□□□□□ -1.47
SPSB3-203ENST00000563705 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
SPSB3-203ENST00000563705 AHNAKQ09666 5890 aaKnown RBP5.83□□□□□ -1.48
SPSB3-203ENST00000563705 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
SPSB3-203ENST00000563705 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
SPSB3-203ENST00000563705 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
SPSB3-203ENST00000563705 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
SPSB3-203ENST00000563705 LCE1EQ5T753 118 aa5.44□□□□□ -1.54
SPSB3-203ENST00000563705 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
SPSB3-203ENST00000563705 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
SPSB3-203ENST00000563705 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
SPSB3-203ENST00000563705 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
SPSB3-203ENST00000563705 LCE1CQ5T751 118 aa5.04□□□□□ -1.6
SPSB3-203ENST00000563705 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
SPSB3-203ENST00000563705 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
SPSB3-203ENST00000563705 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
SPSB3-203ENST00000563705 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
SPSB3-203ENST00000563705 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
SPSB3-203ENST00000563705 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
SPSB3-203ENST00000563705 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
SPSB3-203ENST00000563705 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SPSB3-203ENST00000563705 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
SPSB3-203ENST00000563705 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
SPSB3-203ENST00000563705 KRTAP21-2Q3LI59 83 aa4.2□□□□□ -1.74
SPSB3-203ENST00000563705 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
SPSB3-203ENST00000563705 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SPSB3-203ENST00000563705 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
SPSB3-203ENST00000563705 PRM1P04553 51 aa3.32□□□□□ -1.88
SPSB3-203ENST00000563705 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
SPSB3-203ENST00000563705 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
SPSB3-203ENST00000563705 H3BS24 57 aa2.88□□□□□ -1.95
SPSB3-203ENST00000563705 INE1O15225 51 aa2.66□□□□□ -1.98
SPSB3-203ENST00000563705 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
SPSB3-203ENST00000563705 A0A0A0MQY5 61 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 52.1 ms