RNA–Protein interactions for RNA: ENST00000563705.5

SPSB3-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-203ENST00000563705 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.5■■□□□ 1.512e-25■■□□□ 13
SPSB3-203ENST00000563705 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.65■■□□□ 1.72e-17■■■■■ 95.5
SPSB3-203ENST00000563705 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.65■□□□□ 0.94e-13■■■■■ 88.3
SPSB3-203ENST00000563705 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.33■■□□□ 1.658e-12■■■■■ 36
SPSB3-203ENST00000563705 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.48■□□□□ 0.711e-10■■■■□ 24.5
SPSB3-203ENST00000563705 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.22■□□□□ 0.513e-10■■■■■ 30.2
SPSB3-203ENST00000563705 ZNF622Q969S3 477 aaKnown RBP eCLIP27.74■■■□□ 2.033e-9■□□□□ 9
SPSB3-203ENST00000563705 EFTUD2Q15029 972 aaKnown RBP eCLIP19.88■□□□□ 0.778e-9■■■■□ 20.6
SPSB3-203ENST00000563705 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.41■□□□□ 0.382e-8■■■■■ 31.8
SPSB3-203ENST00000563705 AQRO60306 1485 aaKnown RBP eCLIP37.89■■■■□ 3.662e-8■■■■■ 44.6
SPSB3-203ENST00000563705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.16■■□□□ 1.781e-7■■■□□ 19
SPSB3-203ENST00000563705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.45■■□□□ 1.181e-7■■■■■ 247.2
SPSB3-203ENST00000563705 PPIGQ13427 754 aaKnown RBP eCLIP24.56■■□□□ 1.526e-7■■□□□ 11.8
SPSB3-203ENST00000563705 SF3B4Q15427 424 aaKnown RBP eCLIP19.34■□□□□ 0.698e-7■■□□□ 14.4
SPSB3-203ENST00000563705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.64■■■□□ 2.821e-6■■■□□ 17.1
SPSB3-203ENST00000563705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.63■■■□□ 2.811e-6■■■■□ 25.8
SPSB3-203ENST00000563705 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.41■■□□□ 1.022e-6■□□□□ 9.8
Retrieved 17 of 17 RNA–protein pairs in 94.4 ms