RNA–Protein interactions for RNA: ENST00000563705.5

SPSB3-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-203ENST00000563705 NISCHQ9Y2I1 1504 aa52.5■■■■■ 6
SPSB3-203ENST00000563705 CCDC180Q9P1Z9 1646 aa46.99■■■■■ 5.11
SPSB3-203ENST00000563705 ABCC9O60706 1549 aa46.35■■■■■ 5.01
SPSB3-203ENST00000563705 RB1CC1Q8TDY2 1594 aa44.44■■■■■ 4.71
SPSB3-203ENST00000563705 NACADO15069 1562 aa44.27■■■■■ 4.68
SPSB3-203ENST00000563705 DCAF8L2P0C7V8 631 aa43.91■■■■■ 4.62
SPSB3-203ENST00000563705 MYO15BQ96JP2 1530 aa43.88■■■■■ 4.61
SPSB3-203ENST00000563705 ZCCHC6Q5VYS8 1495 aaKnown RBP43.65■■■■■ 4.58
SPSB3-203ENST00000563705 DCAF1Q9Y4B6 1507 aa43.48■■■■■ 4.55
SPSB3-203ENST00000563705 UNC13AQ9UPW8 1703 aa43.42■■■■■ 4.54
SPSB3-203ENST00000563705 PABPN1Q86U42 306 aaKnown RBP eCLIP43.16■■■■■ 4.5
SPSB3-203ENST00000563705 BICRAQ9NZM4 1560 aa43.1■■■■■ 4.49
SPSB3-203ENST00000563705 DNAJC5BQ9UF47 199 aa42.96■■■■■ 4.47
SPSB3-203ENST00000563705 SCRIBQ14160 1630 aa42.75■■■■■ 4.43
SPSB3-203ENST00000563705 SHROOM4Q9ULL8 1493 aa42.7■■■■■ 4.43
SPSB3-203ENST00000563705 EIF4G1Q04637 1599 aaKnown RBP42.01■■■■■ 4.32
SPSB3-203ENST00000563705 CC2D2AQ9P2K1 1620 aa41.95■■■■■ 4.31
SPSB3-203ENST00000563705 CECR2Q9BXF3 1484 aa41.74■■■■■ 4.27
SPSB3-203ENST00000563705 SMARCA4P51532 1647 aa40.87■■■■■ 4.13
SPSB3-203ENST00000563705 NCAPD3P42695 1498 aa40.83■■■■■ 4.13
SPSB3-203ENST00000563705 ATAD2BQ9ULI0 1458 aa40.76■■■■■ 4.12
SPSB3-203ENST00000563705 BAZ1AQ9NRL2 1556 aaPredicted RBP40.75■■■■■ 4.11
SPSB3-203ENST00000563705 SMARCA2P51531 1590 aa40.73■■■■■ 4.11
SPSB3-203ENST00000563705 HMGXB3Q12766 1538 aa40.63■■■■■ 4.1
SPSB3-203ENST00000563705 PEG3Q9GZU2 1588 aa40.52■■■■■ 4.08
SPSB3-203ENST00000563705 MROH2BQ7Z745 1585 aa40.43■■■■■ 4.06
SPSB3-203ENST00000563705 BAZ1BQ9UIG0 1483 aaKnown RBP40.4■■■■■ 4.06
SPSB3-203ENST00000563705 ERCC6Q03468 1493 aa40.03■■■■■ 4
SPSB3-203ENST00000563705 WIZO95785 1651 aa39.96■■■■□ 3.99
SPSB3-203ENST00000563705 NESP48681 1621 aa39.96■■■■□ 3.99
SPSB3-203ENST00000563705 LAMC3Q9Y6N6 1575 aa39.87■■■■□ 3.97
SPSB3-203ENST00000563705 CUX2O14529 1486 aa39.86■■■■□ 3.97
SPSB3-203ENST00000563705 RSF1Q96T23 1441 aaPredicted RBP39.77■■■■□ 3.96
SPSB3-203ENST00000563705 CADPSQ9ULU8 1353 aa39.59■■■■□ 3.93
SPSB3-203ENST00000563705 PDS5BQ9NTI5 1447 aa39.58■■■■□ 3.93
SPSB3-203ENST00000563705 TOP2AP11388 1531 aaKnown RBP39.56■■■■□ 3.92
SPSB3-203ENST00000563705 THOC2Q8NI27 1593 aaKnown RBP39.55■■■■□ 3.92
SPSB3-203ENST00000563705 KIF21AQ7Z4S6 1674 aa39.52■■■■□ 3.92
SPSB3-203ENST00000563705 CFTRP13569 1480 aa39.27■■■■□ 3.88
SPSB3-203ENST00000563705 MRC2Q9UBG0 1479 aa39.23■■■■□ 3.87
SPSB3-203ENST00000563705 CEP164Q9UPV0 1460 aa39.17■■■■□ 3.86
SPSB3-203ENST00000563705 DNAJC5Q9H3Z4 198 aa39.16■■■■□ 3.86
SPSB3-203ENST00000563705 FANCD2Q9BXW9 1451 aa39.14■■■■□ 3.86
SPSB3-203ENST00000563705 WDR62O43379 1518 aa39.14■■■■□ 3.86
SPSB3-203ENST00000563705 CCDC88BA6NC98 1476 aa39.04■■■■□ 3.84
SPSB3-203ENST00000563705 PRDM2Q13029 1718 aa38.98■■■■□ 3.83
SPSB3-203ENST00000563705 URB2Q14146 1524 aaKnown RBP38.79■■■■□ 3.8
SPSB3-203ENST00000563705 ABCC8Q09428 1581 aa38.46■■■■□ 3.75
SPSB3-203ENST00000563705 TOPBP1Q92547 1522 aa38.46■■■■□ 3.75
SPSB3-203ENST00000563705 DNMBPQ6XZF7 1577 aa38.4■■■■□ 3.74
SPSB3-203ENST00000563705 IFT140Q96RY7 1462 aa38.37■■■■□ 3.73
SPSB3-203ENST00000563705 SUPT5HO00267 1087 aaKnown RBP38.24■■■■□ 3.71
SPSB3-203ENST00000563705 ZNF608Q9ULD9 1512 aaPredicted RBP38.19■■■■□ 3.7
SPSB3-203ENST00000563705 TARBP1Q13395 1621 aaKnown RBP38.11■■■■□ 3.69
SPSB3-203ENST00000563705 POLA1P09884 1462 aaPredicted RBP38.1■■■■□ 3.69
SPSB3-203ENST00000563705 EIF4G3O43432 1585 aaKnown RBP38.08■■■■□ 3.69
SPSB3-203ENST00000563705 OSCARQ8IYS5 282 aa38.01■■■■□ 3.68
SPSB3-203ENST00000563705 CUX1P39880 1505 aa37.97■■■■□ 3.67
SPSB3-203ENST00000563705 FGD5Q6ZNL6 1462 aa37.92■■■■□ 3.66
SPSB3-203ENST00000563705 SOGA1O94964 1423 aa37.9■■■■□ 3.66
SPSB3-203ENST00000563705 RAD54L2Q9Y4B4 1467 aa37.9■■■■□ 3.66
SPSB3-203ENST00000563705 AQRO60306 1485 aaKnown RBP eCLIP37.89■■■■□ 3.662e-8■■■■■ 44.6
SPSB3-203ENST00000563705 WDR97A6NE52 1622 aa37.85■■■■□ 3.65
SPSB3-203ENST00000563705 TDRD9Q8NDG6 1382 aaKnown RBP37.72■■■■□ 3.63
SPSB3-203ENST00000563705 CHD1O14646 1710 aa37.68■■■■□ 3.62
SPSB3-203ENST00000563705 TRIM41Q8WV44 630 aa37.58■■■■□ 3.61
SPSB3-203ENST00000563705 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
SPSB3-203ENST00000563705 GRIN2BQ13224 1484 aa37.57■■■■□ 3.6
SPSB3-203ENST00000563705 ABCA10Q8WWZ4 1543 aa37.56■■■■□ 3.6
SPSB3-203ENST00000563705 BIVM-ERCC5R4GMW8 1640 aa37.55■■■■□ 3.6
SPSB3-203ENST00000563705 MAGI1Q96QZ7 1491 aaPredicted RBP37.55■■■■□ 3.6
SPSB3-203ENST00000563705 TOP2BQ02880 1626 aa37.54■■■■□ 3.6
SPSB3-203ENST00000563705 WRNQ14191 1432 aaPredicted RBP eCLIP37.53■■■■□ 3.6
SPSB3-203ENST00000563705 RIMBP3CA6NJZ7 1639 aa37.52■■■■□ 3.6
SPSB3-203ENST00000563705 RIMBP3BA6NNM3 1639 aa37.52■■■■□ 3.6
SPSB3-203ENST00000563705 RIMBP3Q9UFD9 1639 aa37.52■■■■□ 3.6
SPSB3-203ENST00000563705 GAPVD1Q14C86 1478 aa37.48■■■■□ 3.59
SPSB3-203ENST00000563705 FBLN2P98095 1184 aa37.48■■■■□ 3.59
SPSB3-203ENST00000563705 PBRM1Q86U86 1689 aa37.47■■■■□ 3.59
SPSB3-203ENST00000563705 ABCA5Q8WWZ7 1642 aa37.47■■■■□ 3.59
SPSB3-203ENST00000563705 SYNJ1O43426 1573 aa37.47■■■■□ 3.59
SPSB3-203ENST00000563705 ARHGEF11O15085 1522 aa37.46■■■■□ 3.59
SPSB3-203ENST00000563705 SYNJ2O15056 1496 aa37.39■■■■□ 3.58
SPSB3-203ENST00000563705 CHMP7Q8WUX9 453 aaPredicted RBP37.34■■■■□ 3.57
SPSB3-203ENST00000563705 CLASP1Q7Z460 1538 aa37.29■■■■□ 3.56
SPSB3-203ENST00000563705 ADAMTS12P58397 1594 aa37.16■■■■□ 3.54
SPSB3-203ENST00000563705 ARAP1Q96P48 1450 aa37.12■■■■□ 3.53
SPSB3-203ENST00000563705 ERICH3Q5RHP9 1530 aa37.11■■■■□ 3.53
SPSB3-203ENST00000563705 GRIN2AQ12879 1464 aa37.08■■■■□ 3.53
SPSB3-203ENST00000563705 FHAD1B1AJZ9 1412 aa37.04■■■■□ 3.52
SPSB3-203ENST00000563705 CYB5RLQ6IPT4 315 aa37.04■■■■□ 3.52
SPSB3-203ENST00000563705 NUP160Q12769 1436 aa36.95■■■■□ 3.51
SPSB3-203ENST00000563705 CEP170Q5SW79 1584 aa36.91■■■■□ 3.5
SPSB3-203ENST00000563705 KIF27Q86VH2 1401 aa36.79■■■■□ 3.48
SPSB3-203ENST00000563705 SHROOM2Q13796 1616 aa36.75■■■■□ 3.47
SPSB3-203ENST00000563705 CUL7Q14999 1698 aa36.69■■■■□ 3.46
SPSB3-203ENST00000563705 ERCC6L2Q5T890 1561 aa36.67■■■■□ 3.46
SPSB3-203ENST00000563705 IGF1RP08069 1367 aa36.66■■■■□ 3.46
SPSB3-203ENST00000563705 RUSC2Q8N2Y8 1516 aa36.62■■■■□ 3.45
SPSB3-203ENST00000563705 PRG4Q92954 1404 aaPredicted RBP36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms