RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 S100ZQ8WXG8 99 aa-2.08□□□□□ -2.74
USP8-218ENST00000561330 TTTY10Q9BZA0 68 aa-2.08□□□□□ -2.74
USP8-218ENST00000561330 SCRIBQ14160 1630 aa-2.09□□□□□ -2.74
USP8-218ENST00000561330 IGIPA6NJ69 53 aa-2.09□□□□□ -2.74
USP8-218ENST00000561330 ASPMQ8IZT6 3477 aa-2.1□□□□□ -2.75
USP8-218ENST00000561330 LOC400499M0QZD8 3231 aa-2.1□□□□□ -2.75
USP8-218ENST00000561330 H0YGX0 51 aa-2.1□□□□□ -2.75
USP8-218ENST00000561330 SYCP2Q9BX26 1530 aa-2.12□□□□□ -2.75
USP8-218ENST00000561330 UGGT1Q9NYU2 1555 aa-2.13□□□□□ -2.75
USP8-218ENST00000561330 SMCO4Q9NRQ5 59 aa-2.14□□□□□ -2.75
USP8-218ENST00000561330 PDCD5O14737 125 aa-2.15□□□□□ -2.75
USP8-218ENST00000561330 TFF3Q07654 80 aa-2.15□□□□□ -2.75
USP8-218ENST00000561330 BRCA2P51587 3418 aa-2.19□□□□□ -2.76
USP8-218ENST00000561330 VCANP13611 3396 aa-2.2□□□□□ -2.76
USP8-218ENST00000561330 DDX60Q8IY21 1712 aaKnown RBP-2.21□□□□□ -2.76
USP8-218ENST00000561330 CPS1P31327 1500 aa-2.22□□□□□ -2.77
USP8-218ENST00000561330 AGLP35573 1532 aa-2.22□□□□□ -2.77
USP8-218ENST00000561330 CENPFP49454 3210 aa-2.23□□□□□ -2.77
USP8-218ENST00000561330 CLTCL1P53675 1640 aa-2.23□□□□□ -2.77
USP8-218ENST00000561330 PLNP26678 52 aa-2.23□□□□□ -2.77
USP8-218ENST00000561330 DEFB133Q30KQ1 61 aa-2.24□□□□□ -2.77
USP8-218ENST00000561330 EFCAB5A4FU69 1503 aa-2.24□□□□□ -2.77
USP8-218ENST00000561330 SMIM2Q9BVW6 85 aa-2.25□□□□□ -2.77
USP8-218ENST00000561330 CDH23Q9H251 3354 aa-2.25□□□□□ -2.77
USP8-218ENST00000561330 IQGAP1P46940 1657 aa-2.26□□□□□ -2.77
USP8-218ENST00000561330 ABCA5Q8WWZ7 1642 aa-2.27□□□□□ -2.77
USP8-218ENST00000561330 NFAT5O94916 1531 aa-2.27□□□□□ -2.77
USP8-218ENST00000561330 ABCA10Q8WWZ4 1543 aa-2.28□□□□□ -2.77
USP8-218ENST00000561330 RHPN1-AS1Q9BWJ2 59 aa-2.29□□□□□ -2.78
USP8-218ENST00000561330 TRPM2O94759 1503 aa-2.29□□□□□ -2.78
USP8-218ENST00000561330 PRXQ9BXM0 1461 aa-2.3□□□□□ -2.78
USP8-218ENST00000561330 VPS13AQ96RL7 3174 aa-2.3□□□□□ -2.78
USP8-218ENST00000561330 ADCY10Q96PN6 1610 aa-2.32□□□□□ -2.78
USP8-218ENST00000561330 A0A087WWC5 75 aa-2.33□□□□□ -2.78
USP8-218ENST00000561330 A0A096LNI7 61 aa-2.33□□□□□ -2.78
USP8-218ENST00000561330 HTN1P15515 57 aa-2.34□□□□□ -2.78
USP8-218ENST00000561330 CD52P31358 61 aa-2.34□□□□□ -2.78
USP8-218ENST00000561330 LINC01590Q5TEZ4 76 aa-2.34□□□□□ -2.78
USP8-218ENST00000561330 TOMM7Q9P0U1 55 aa-2.37□□□□□ -2.79
USP8-218ENST00000561330 SMIM5Q71RC9 77 aa-2.38□□□□□ -2.79
USP8-218ENST00000561330 NDUFA1O15239 70 aa-2.4□□□□□ -2.79
USP8-218ENST00000561330 DEFB124Q8NES8 71 aa-2.4□□□□□ -2.79
USP8-218ENST00000561330 DUOX1Q9NRD9 1551 aa-2.42□□□□□ -2.8
USP8-218ENST00000561330 UTRNP46939 3433 aa-2.43□□□□□ -2.8
USP8-218ENST00000561330 FANCD2Q9BXW9 1451 aa-2.45□□□□□ -2.8
USP8-218ENST00000561330 ABCC8Q09428 1581 aa-2.46□□□□□ -2.8
USP8-218ENST00000561330 CMC2Q9NRP2 79 aa-2.49□□□□□ -2.81
USP8-218ENST00000561330 ERICH3Q5RHP9 1530 aa-2.5□□□□□ -2.81
USP8-218ENST00000561330 TOP2AP11388 1531 aaKnown RBP-2.52□□□□□ -2.81
USP8-218ENST00000561330 LINC01556Q5JQF7 62 aa-2.53□□□□□ -2.81
USP8-218ENST00000561330 SAMD9LQ8IVG5 1584 aa-2.55□□□□□ -2.82
USP8-218ENST00000561330 RPL39P62891 51 aaKnown RBP-2.56□□□□□ -2.82
USP8-218ENST00000561330 ATP7AQ04656 1500 aa-2.61□□□□□ -2.83
USP8-218ENST00000561330 DEFB104AQ8WTQ1 72 aa-2.63□□□□□ -2.83
USP8-218ENST00000561330 RPL39LQ96EH5 51 aaKnown RBP-2.63□□□□□ -2.83
USP8-218ENST00000561330 MROH2BQ7Z745 1585 aa-2.64□□□□□ -2.83
USP8-218ENST00000561330 H3BUX3 64 aa-2.69□□□□□ -2.84
USP8-218ENST00000561330 GOLGB1Q14789 3259 aaKnown RBP-2.78□□□□□ -2.85
USP8-218ENST00000561330 APELAP0DMC3 54 aa-2.78□□□□□ -2.85
USP8-218ENST00000561330 SMIM31A0A1B0GVY4 71 aa-2.79□□□□□ -2.86
USP8-218ENST00000561330 A0A096LPF7 62 aa-2.8□□□□□ -2.86
USP8-218ENST00000561330 IQGAP2Q13576 1575 aa-2.83□□□□□ -2.86
USP8-218ENST00000561330 K7EIM0 57 aa-2.85□□□□□ -2.87
USP8-218ENST00000561330 SNRPGP15A8MWD9 76 aa-2.89□□□□□ -2.87
USP8-218ENST00000561330 HTN3P15516 51 aa-2.93□□□□□ -2.88
USP8-218ENST00000561330 PRCDQ00LT1 54 aa-2.95□□□□□ -2.88
USP8-218ENST00000561330 ARHGAP5-AS1Q96IT6 56 aa-2.97□□□□□ -2.88
USP8-218ENST00000561330 TMEM167AQ8TBQ9 72 aa-2.99□□□□□ -2.89
USP8-218ENST00000561330 TOMM5Q8N4H5 51 aa-3.02□□□□□ -2.89
USP8-218ENST00000561330 GCC2Q8IWJ2 1684 aa-3.14□□□□□ -2.91
USP8-218ENST00000561330 H3BSH0 61 aa-3.14□□□□□ -2.91
USP8-218ENST00000561330 Q9Y3F1 56 aa-3.15□□□□□ -2.91
USP8-218ENST00000561330 RPL39P5Q59GN2 51 aa-3.17□□□□□ -2.92
USP8-218ENST00000561330 SNRPGP62308 76 aaKnown RBP-3.2□□□□□ -2.92
USP8-218ENST00000561330 DEFB108AA8MXU0 73 aa-3.22□□□□□ -2.92
USP8-218ENST00000561330 COX14Q96I36 57 aa-3.28□□□□□ -2.93
USP8-218ENST00000561330 DEFB108BQ8NET1 73 aa-3.39□□□□□ -2.95
USP8-218ENST00000561330 STATHP02808 62 aa-3.6□□□□□ -2.99
Retrieved 78 of 20,778 RNA–protein pairs in 130.3 ms