RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 HILPDAQ9Y5L2 63 aa-4.19□□□□□ -3.08
CASC4-211ENST00000561305 LINC01549A6NIU2 74 aa-4.2□□□□□ -3.08
CASC4-211ENST00000561305 CDH23Q9H251 3354 aa-4.21□□□□□ -3.08
CASC4-211ENST00000561305 DUOX2Q9NRD8 1548 aa-4.21□□□□□ -3.08
CASC4-211ENST00000561305 UGGT1Q9NYU2 1555 aa-4.22□□□□□ -3.08
CASC4-211ENST00000561305 H0YGX0 51 aa-4.22□□□□□ -3.08
CASC4-211ENST00000561305 SMIM2Q9BVW6 85 aa-4.22□□□□□ -3.08
CASC4-211ENST00000561305 RHPN1-AS1Q9BWJ2 59 aa-4.22□□□□□ -3.08
CASC4-211ENST00000561305 ABCA9Q8IUA7 1624 aa-4.22□□□□□ -3.09
CASC4-211ENST00000561305 AGLP35573 1532 aa-4.22□□□□□ -3.09
CASC4-211ENST00000561305 CD52P31358 61 aa-4.23□□□□□ -3.09
CASC4-211ENST00000561305 BRCA2P51587 3418 aa-4.24□□□□□ -3.09
CASC4-211ENST00000561305 TFF3Q07654 80 aa-4.27□□□□□ -3.09
CASC4-211ENST00000561305 RB1CC1Q8TDY2 1594 aa-4.31□□□□□ -3.1
CASC4-211ENST00000561305 PEG3Q9GZU2 1588 aa-4.31□□□□□ -3.1
CASC4-211ENST00000561305 HTN1P15515 57 aa-4.32□□□□□ -3.1
CASC4-211ENST00000561305 VPS13AQ96RL7 3174 aa-4.33□□□□□ -3.1
CASC4-211ENST00000561305 DDX60Q8IY21 1712 aaKnown RBP-4.35□□□□□ -3.11
CASC4-211ENST00000561305 TRPM2O94759 1503 aa-4.36□□□□□ -3.11
CASC4-211ENST00000561305 LINC01590Q5TEZ4 76 aa-4.37□□□□□ -3.11
CASC4-211ENST00000561305 CLTCL1P53675 1640 aa-4.37□□□□□ -3.11
CASC4-211ENST00000561305 A0A096LNI7 61 aa-4.4□□□□□ -3.11
CASC4-211ENST00000561305 PLNP26678 52 aa-4.43□□□□□ -3.12
CASC4-211ENST00000561305 IQGAP3Q86VI3 1631 aa-4.43□□□□□ -3.12
CASC4-211ENST00000561305 ABCA5Q8WWZ7 1642 aa-4.44□□□□□ -3.12
CASC4-211ENST00000561305 TOMM7Q9P0U1 55 aa-4.46□□□□□ -3.12
CASC4-211ENST00000561305 PRXQ9BXM0 1461 aa-4.46□□□□□ -3.12
CASC4-211ENST00000561305 DEFB124Q8NES8 71 aa-4.5□□□□□ -3.13
CASC4-211ENST00000561305 ADCY10Q96PN6 1610 aa-4.5□□□□□ -3.13
CASC4-211ENST00000561305 CPS1P31327 1500 aa-4.51□□□□□ -3.13
CASC4-211ENST00000561305 UGGT2Q9NYU1 1516 aa-4.52□□□□□ -3.13
CASC4-211ENST00000561305 CCDC18Q5T9S5 1454 aa-4.53□□□□□ -3.13
CASC4-211ENST00000561305 NFAT5O94916 1531 aa-4.55□□□□□ -3.14
CASC4-211ENST00000561305 IQGAP1P46940 1657 aa-4.57□□□□□ -3.14
CASC4-211ENST00000561305 PDCD5O14737 125 aa-4.57□□□□□ -3.14
CASC4-211ENST00000561305 NDUFA1O15239 70 aa-4.61□□□□□ -3.15
CASC4-211ENST00000561305 ABCA10Q8WWZ4 1543 aa-4.62□□□□□ -3.15
CASC4-211ENST00000561305 GNG2P59768 71 aa-4.69□□□□□ -3.16
CASC4-211ENST00000561305 UTRNP46939 3433 aa-4.7□□□□□ -3.16
CASC4-211ENST00000561305 DUOX1Q9NRD9 1551 aa-4.71□□□□□ -3.16
CASC4-211ENST00000561305 EFCAB5A4FU69 1503 aa-4.72□□□□□ -3.16
CASC4-211ENST00000561305 LINC01556Q5JQF7 62 aa-4.74□□□□□ -3.17
CASC4-211ENST00000561305 SMCO4Q9NRQ5 59 aa-4.75□□□□□ -3.17
CASC4-211ENST00000561305 FANCD2Q9BXW9 1451 aa-4.78□□□□□ -3.17
CASC4-211ENST00000561305 ABCC8Q09428 1581 aa-4.8□□□□□ -3.18
CASC4-211ENST00000561305 ERICH3Q5RHP9 1530 aa-4.81□□□□□ -3.18
CASC4-211ENST00000561305 TOP2AP11388 1531 aaKnown RBP-4.82□□□□□ -3.18
CASC4-211ENST00000561305 A0A087WWC5 75 aa-4.87□□□□□ -3.19
CASC4-211ENST00000561305 CMC2Q9NRP2 79 aa-4.87□□□□□ -3.19
CASC4-211ENST00000561305 DEFB104AQ8WTQ1 72 aa-4.88□□□□□ -3.19
CASC4-211ENST00000561305 SAMD9LQ8IVG5 1584 aa-4.89□□□□□ -3.19
CASC4-211ENST00000561305 RPL39P62891 51 aaKnown RBP-4.94□□□□□ -3.2
CASC4-211ENST00000561305 SMIM5Q71RC9 77 aa-4.94□□□□□ -3.2
CASC4-211ENST00000561305 ATP7AQ04656 1500 aa-4.97□□□□□ -3.21
CASC4-211ENST00000561305 H3BUX3 64 aa-5□□□□□ -3.21
CASC4-211ENST00000561305 RPL39LQ96EH5 51 aaKnown RBP-5.07□□□□□ -3.22
CASC4-211ENST00000561305 MROH2BQ7Z745 1585 aa-5.08□□□□□ -3.22
CASC4-211ENST00000561305 GOLGB1Q14789 3259 aaKnown RBP-5.18□□□□□ -3.24
CASC4-211ENST00000561305 APELAP0DMC3 54 aa-5.25□□□□□ -3.25
CASC4-211ENST00000561305 A0A096LPF7 62 aa-5.31□□□□□ -3.26
CASC4-211ENST00000561305 K7EIM0 57 aa-5.43□□□□□ -3.28
CASC4-211ENST00000561305 HTN3P15516 51 aa-5.47□□□□□ -3.29
CASC4-211ENST00000561305 PRCDQ00LT1 54 aa-5.52□□□□□ -3.29
CASC4-211ENST00000561305 IQGAP2Q13576 1575 aa-5.55□□□□□ -3.3
CASC4-211ENST00000561305 SNRPGP15A8MWD9 76 aa-5.59□□□□□ -3.3
CASC4-211ENST00000561305 TMEM167AQ8TBQ9 72 aa-5.6□□□□□ -3.31
CASC4-211ENST00000561305 ARHGAP5-AS1Q96IT6 56 aa-5.61□□□□□ -3.31
CASC4-211ENST00000561305 Q9Y3F1 56 aa-5.77□□□□□ -3.33
CASC4-211ENST00000561305 SMIM31A0A1B0GVY4 71 aa-5.78□□□□□ -3.33
CASC4-211ENST00000561305 TOMM5Q8N4H5 51 aa-5.8□□□□□ -3.34
CASC4-211ENST00000561305 H3BSH0 61 aa-5.86□□□□□ -3.35
CASC4-211ENST00000561305 SNRPGP62308 76 aaKnown RBP-6.06□□□□□ -3.38
CASC4-211ENST00000561305 RPL39P5Q59GN2 51 aa-6.07□□□□□ -3.38
CASC4-211ENST00000561305 COX14Q96I36 57 aa-6.07□□□□□ -3.38
CASC4-211ENST00000561305 DEFB108AA8MXU0 73 aa-6.15□□□□□ -3.39
CASC4-211ENST00000561305 GCC2Q8IWJ2 1684 aa-6.17□□□□□ -3.4
CASC4-211ENST00000561305 DEFB108BQ8NET1 73 aa-6.4□□□□□ -3.43
CASC4-211ENST00000561305 STATHP02808 62 aa-6.75□□□□□ -3.49
Retrieved 78 of 20,778 RNA–protein pairs in 63.6 ms