RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 KRTAP12-1P59990 96 aa5.42□□□□□ -1.54
HERC1-207ENST00000560316 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
HERC1-207ENST00000560316 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.32□□□□□ -1.56
HERC1-207ENST00000560316 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
HERC1-207ENST00000560316 TNP1P09430 55 aa5.3□□□□□ -1.56
HERC1-207ENST00000560316 AHNAKQ09666 5890 aaKnown RBP5.3□□□□□ -1.56
HERC1-207ENST00000560316 PCP4L1A6NKN8 68 aa5.29□□□□□ -1.56
HERC1-207ENST00000560316 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
HERC1-207ENST00000560316 SERP1Q9Y6X1 66 aa5.28□□□□□ -1.56
HERC1-207ENST00000560316 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
HERC1-207ENST00000560316 A0A1B0GU33 70 aa5.26□□□□□ -1.57
HERC1-207ENST00000560316 SEC61GP60059 68 aa5.26□□□□□ -1.57
HERC1-207ENST00000560316 SNURFQ9Y675 71 aa5.26□□□□□ -1.57
HERC1-207ENST00000560316 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
HERC1-207ENST00000560316 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
HERC1-207ENST00000560316 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
HERC1-207ENST00000560316 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
HERC1-207ENST00000560316 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
HERC1-207ENST00000560316 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
HERC1-207ENST00000560316 COA5Q86WW8 74 aa5.15□□□□□ -1.59
HERC1-207ENST00000560316 A8MU10 97 aa5.12□□□□□ -1.59
HERC1-207ENST00000560316 SMIM26A0A096LP01 95 aa5.09□□□□□ -1.59
HERC1-207ENST00000560316 J3QR89 54 aa5.06□□□□□ -1.6
HERC1-207ENST00000560316 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
HERC1-207ENST00000560316 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
HERC1-207ENST00000560316 A0A1B0GV90 55 aa4.94□□□□□ -1.62
HERC1-207ENST00000560316 MT1AP04731 61 aa4.94□□□□□ -1.62
HERC1-207ENST00000560316 SERP2Q8N6R1 65 aa4.9□□□□□ -1.63
HERC1-207ENST00000560316 A0A1B0GU69 56 aa4.89□□□□□ -1.63
HERC1-207ENST00000560316 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
HERC1-207ENST00000560316 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
HERC1-207ENST00000560316 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
HERC1-207ENST00000560316 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
HERC1-207ENST00000560316 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
HERC1-207ENST00000560316 H7BZZ5 65 aa4.61□□□□□ -1.67
HERC1-207ENST00000560316 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
HERC1-207ENST00000560316 K7ERU9 68 aa4.59□□□□□ -1.67
HERC1-207ENST00000560316 MT3P25713 68 aa4.54□□□□□ -1.68
HERC1-207ENST00000560316 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
HERC1-207ENST00000560316 COX7CP15954 63 aa4.51□□□□□ -1.69
HERC1-207ENST00000560316 KRTAP4-4Q9BYR3 166 aa4.44□□□□□ -1.7
HERC1-207ENST00000560316 UQCR11O14957 56 aa4.38□□□□□ -1.71
HERC1-207ENST00000560316 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
HERC1-207ENST00000560316 K7ERS5 55 aa4.25□□□□□ -1.73
HERC1-207ENST00000560316 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
HERC1-207ENST00000560316 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
HERC1-207ENST00000560316 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
HERC1-207ENST00000560316 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
HERC1-207ENST00000560316 CCDC179H3BU77 68 aa4.01□□□□□ -1.77
HERC1-207ENST00000560316 ANAPC13Q9BS18 74 aa4.01□□□□□ -1.77
HERC1-207ENST00000560316 LCE1CQ5T751 118 aa4□□□□□ -1.77
HERC1-207ENST00000560316 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
HERC1-207ENST00000560316 Q1T7F1 81 aa3.91□□□□□ -1.78
HERC1-207ENST00000560316 ROMO1P60602 79 aa3.87□□□□□ -1.79
HERC1-207ENST00000560316 PSPHP1O15172 72 aa3.85□□□□□ -1.79
HERC1-207ENST00000560316 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
HERC1-207ENST00000560316 TMEM258P61165 79 aa3.74□□□□□ -1.81
HERC1-207ENST00000560316 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
HERC1-207ENST00000560316 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
HERC1-207ENST00000560316 A6NED7 52 aa3.66□□□□□ -1.82
HERC1-207ENST00000560316 V9GYY9 64 aa3.66□□□□□ -1.82
HERC1-207ENST00000560316 PCP4P48539 62 aa3.59□□□□□ -1.83
HERC1-207ENST00000560316 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
HERC1-207ENST00000560316 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
HERC1-207ENST00000560316 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
HERC1-207ENST00000560316 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
HERC1-207ENST00000560316 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
HERC1-207ENST00000560316 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
HERC1-207ENST00000560316 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
HERC1-207ENST00000560316 PRAC1Q96KF2 57 aa2.75□□□□□ -1.97
HERC1-207ENST00000560316 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
HERC1-207ENST00000560316 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
HERC1-207ENST00000560316 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
HERC1-207ENST00000560316 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
HERC1-207ENST00000560316 PRM1P04553 51 aa1.97□□□□□ -2.09
HERC1-207ENST00000560316 PRO0628Q9UI54 55 aa1.87□□□□□ -2.11
HERC1-207ENST00000560316 KTN1-AS1Q86SY8 53 aa1.77□□□□□ -2.13
HERC1-207ENST00000560316 INE1O15225 51 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 115.8 ms