RNA–Protein interactions for RNA: ENST00000558031.5

CRNDE-204, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-204ENST00000558031 MT1AP04731 61 aa1□□□□□ -2.25
CRNDE-204ENST00000558031 SPTAN1Q13813 2472 aaKnown RBP1□□□□□ -2.25
CRNDE-204ENST00000558031 KRTAP6-2Q3LI66 62 aa0.99□□□□□ -2.25
CRNDE-204ENST00000558031 VCANP13611 3396 aa0.99□□□□□ -2.25
CRNDE-204ENST00000558031 UNC80Q8N2C7 3258 aa0.98□□□□□ -2.25
CRNDE-204ENST00000558031 PCNTO95613 3336 aa0.97□□□□□ -2.25
CRNDE-204ENST00000558031 BRCA2P51587 3418 aa0.97□□□□□ -2.25
CRNDE-204ENST00000558031 SPRR2DP22532 72 aa0.97□□□□□ -2.25
CRNDE-204ENST00000558031 SPRR2BP35325 72 aa0.94□□□□□ -2.26
CRNDE-204ENST00000558031 MAST4O15021 2626 aa0.94□□□□□ -2.26
CRNDE-204ENST00000558031 STARD9Q9P2P6 4700 aa0.93□□□□□ -2.26
CRNDE-204ENST00000558031 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
CRNDE-204ENST00000558031 WDFY3Q8IZQ1 3526 aa0.93□□□□□ -2.26
CRNDE-204ENST00000558031 EYSQ5T1H1 3165 aa0.93□□□□□ -2.26
CRNDE-204ENST00000558031 LRP1BQ9NZR2 4599 aa0.93□□□□□ -2.26
CRNDE-204ENST00000558031 IGSF10Q6WRI0 2623 aa0.92□□□□□ -2.26
CRNDE-204ENST00000558031 DNAH14Q0VDD8 3507 aa0.91□□□□□ -2.26
CRNDE-204ENST00000558031 SPRR2AP35326 72 aa0.9□□□□□ -2.27
CRNDE-204ENST00000558031 SPRR2FQ96RM1 72 aa0.9□□□□□ -2.27
CRNDE-204ENST00000558031 HERC1Q15751 4861 aa0.89□□□□□ -2.27
CRNDE-204ENST00000558031 MYO9AB2RTY4 2548 aa0.88□□□□□ -2.27
CRNDE-204ENST00000558031 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
CRNDE-204ENST00000558031 LRP2P98164 4655 aa0.85□□□□□ -2.27
CRNDE-204ENST00000558031 SPRR2EP22531 72 aa0.83□□□□□ -2.28
CRNDE-204ENST00000558031 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
CRNDE-204ENST00000558031 MT1EP04732 61 aa0.8□□□□□ -2.28
CRNDE-204ENST00000558031 SPRR2GQ9BYE4 73 aa0.79□□□□□ -2.28
CRNDE-204ENST00000558031 CDH23Q9H251 3354 aa0.78□□□□□ -2.28
CRNDE-204ENST00000558031 MT1LQ93083 61 aa0.76□□□□□ -2.29
CRNDE-204ENST00000558031 MT1XP80297 61 aa0.74□□□□□ -2.29
CRNDE-204ENST00000558031 DNHD1Q96M86 4753 aa0.71□□□□□ -2.3
CRNDE-204ENST00000558031 HMCN2Q8NDA2 5059 aa0.7□□□□□ -2.3
CRNDE-204ENST00000558031 MT1HP80294 61 aa0.7□□□□□ -2.3
CRNDE-204ENST00000558031 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
CRNDE-204ENST00000558031 KRTAP19-8Q3LI54 63 aa0.68□□□□□ -2.3
CRNDE-204ENST00000558031 MDN1Q9NU22 5596 aa0.67□□□□□ -2.3
CRNDE-204ENST00000558031 KRTAP19-2Q3LHN2 52 aa0.66□□□□□ -2.3
CRNDE-204ENST00000558031 KRTAP19-7Q3SYF9 63 aa0.65□□□□□ -2.31
CRNDE-204ENST00000558031 MUC2Q02817 5179 aa0.63□□□□□ -2.31
CRNDE-204ENST00000558031 USH2AO75445 5202 aa0.63□□□□□ -2.31
CRNDE-204ENST00000558031 KMT2CQ8NEZ4 4911 aaKnown RBP0.63□□□□□ -2.31
CRNDE-204ENST00000558031 SSPOA2VEC9 5147 aa0.62□□□□□ -2.31
CRNDE-204ENST00000558031 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
CRNDE-204ENST00000558031 MT1GP13640 62 aa0.62□□□□□ -2.31
CRNDE-204ENST00000558031 HERC2O95714 4834 aa0.61□□□□□ -2.31
CRNDE-204ENST00000558031 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
CRNDE-204ENST00000558031 HYDINQ4G0P3 5121 aa0.59□□□□□ -2.31
CRNDE-204ENST00000558031 MT1BP07438 61 aa0.59□□□□□ -2.31
CRNDE-204ENST00000558031 FAT4Q6V0I7 4981 aa0.58□□□□□ -2.32
CRNDE-204ENST00000558031 BIRC6Q9NR09 4857 aa0.58□□□□□ -2.32
CRNDE-204ENST00000558031 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
CRNDE-204ENST00000558031 GPR98Q8WXG9 6306 aa0.57□□□□□ -2.32
CRNDE-204ENST00000558031 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
CRNDE-204ENST00000558031 RYR1P21817 5038 aa0.56□□□□□ -2.32
CRNDE-204ENST00000558031 RYR3Q15413 4870 aa0.54□□□□□ -2.32
CRNDE-204ENST00000558031 PCLOQ9Y6V0 5065 aa0.54□□□□□ -2.32
CRNDE-204ENST00000558031 MT1MQ8N339 61 aa0.51□□□□□ -2.33
CRNDE-204ENST00000558031 MT2AP02795 61 aa0.49□□□□□ -2.33
CRNDE-204ENST00000558031 UBR4Q5T4S7 5183 aa0.48□□□□□ -2.33
CRNDE-204ENST00000558031 RNF213Q63HN8 5207 aa0.47□□□□□ -2.33
CRNDE-204ENST00000558031 KMT2DO14686 5537 aa0.47□□□□□ -2.33
CRNDE-204ENST00000558031 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
CRNDE-204ENST00000558031 MT1FP04733 61 aa0.42□□□□□ -2.34
CRNDE-204ENST00000558031 SYNE2Q8WXH0 6885 aaKnown RBP0.41□□□□□ -2.34
CRNDE-204ENST00000558031 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
CRNDE-204ENST00000558031 MACF1Q9UPN3 7388 aaKnown RBP0.35□□□□□ -2.35
CRNDE-204ENST00000558031 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.35
CRNDE-204ENST00000558031 EPPK1P58107 5090 aaKnown RBP0.34□□□□□ -2.35
CRNDE-204ENST00000558031 MT1HL1P0DM35 61 aa0.34□□□□□ -2.36
CRNDE-204ENST00000558031 RYR2Q92736 4967 aa0.33□□□□□ -2.36
CRNDE-204ENST00000558031 KIAA1109Q2LD37 5005 aa0.31□□□□□ -2.36
CRNDE-204ENST00000558031 ABCA13Q86UQ4 5058 aa0.27□□□□□ -2.37
CRNDE-204ENST00000558031 MT4P47944 62 aa0.11□□□□□ -2.39
CRNDE-204ENST00000558031 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
CRNDE-204ENST00000558031 DSTQ03001 7570 aaKnown RBP0.05□□□□□ -2.4
CRNDE-204ENST00000558031 KRTAP19-6Q3LI70 58 aa-0.03□□□□□ -2.41
CRNDE-204ENST00000558031 NEBP20929 6669 aa-0.11□□□□□ -2.43
CRNDE-204ENST00000558031 KRTAP20-1Q3LI63 56 aa-0.2□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 75.7 ms