RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-210	ENST00000557206	KRTAP19-3	Q7Z4W3	81 aa		0.75	□□□□□ -2.29
HIF1A-210	ENST00000557206	APOB	P04114	4563 aa	Known RBP	0.75	□□□□□ -2.29
HIF1A-210	ENST00000557206	MYCBP2	O75592	4640 aa		0.74	□□□□□ -2.29
HIF1A-210	ENST00000557206	DYNC1H1	Q14204	4646 aa	Known RBP	0.74	□□□□□ -2.29
HIF1A-210	ENST00000557206	EPPK1	P58107	5090 aa	Known RBP	0.74	□□□□□ -2.29
HIF1A-210	ENST00000557206	DNAH8	Q96JB1	4490 aa		0.74	□□□□□ -2.29
HIF1A-210	ENST00000557206	FAT1	Q14517	4588 aa		0.74	□□□□□ -2.29
HIF1A-210	ENST00000557206	VPS13B	Q7Z7G8	4022 aa		0.73	□□□□□ -2.29
HIF1A-210	ENST00000557206	RYR1	P21817	5038 aa		0.73	□□□□□ -2.29
HIF1A-210	ENST00000557206	HSPG2	P98160	4391 aa		0.73	□□□□□ -2.29
HIF1A-210	ENST00000557206	BIRC6	Q9NR09	4857 aa		0.72	□□□□□ -2.29
HIF1A-210	ENST00000557206	HERC2	O95714	4834 aa		0.72	□□□□□ -2.29
HIF1A-210	ENST00000557206	MT1HL1	P0DM35	61 aa		0.72	□□□□□ -2.29
HIF1A-210	ENST00000557206	FAT3	Q8TDW7	4589 aa		0.71	□□□□□ -2.3
HIF1A-210	ENST00000557206	TNP1	P09430	55 aa		0.71	□□□□□ -2.3
HIF1A-210	ENST00000557206	ABCA13	Q86UQ4	5058 aa		0.71	□□□□□ -2.3
HIF1A-210	ENST00000557206	LRP1	Q07954	4544 aa	Known RBP	0.7	□□□□□ -2.3
HIF1A-210	ENST00000557206	PCLO	Q9Y6V0	5065 aa		0.7	□□□□□ -2.3
HIF1A-210	ENST00000557206	KRTAP2-3	P0C7H8	128 aa		0.7	□□□□□ -2.3
HIF1A-210	ENST00000557206	KRTAP2-4	Q9BYR9	128 aa		0.7	□□□□□ -2.3
HIF1A-210	ENST00000557206	KRTAP2-1	Q9BYU5	128 aa		0.7	□□□□□ -2.3
HIF1A-210	ENST00000557206	HERC1	Q15751	4861 aa		0.68	□□□□□ -2.3
HIF1A-210	ENST00000557206	PKHD1L1	Q86WI1	4243 aa		0.68	□□□□□ -2.3
HIF1A-210	ENST00000557206	LRP2	P98164	4655 aa		0.68	□□□□□ -2.3
HIF1A-210	ENST00000557206	TNXB	P22105	4242 aa		0.67	□□□□□ -2.3
HIF1A-210	ENST00000557206	UBR4	Q5T4S7	5183 aa		0.66	□□□□□ -2.3
HIF1A-210	ENST00000557206	HMCN2	Q8NDA2	5059 aa		0.66	□□□□□ -2.3
HIF1A-210	ENST00000557206	PRM1	P04553	51 aa		0.65	□□□□□ -2.31
HIF1A-210	ENST00000557206	LPA	P08519	4548 aa		0.65	□□□□□ -2.31
HIF1A-210	ENST00000557206	RNF213	Q63HN8	5207 aa		0.64	□□□□□ -2.31
HIF1A-210	ENST00000557206	FSIP2	Q5CZC0	6907 aa		0.64	□□□□□ -2.31
HIF1A-210	ENST00000557206	MUC2	Q02817	5179 aa		0.64	□□□□□ -2.31
HIF1A-210	ENST00000557206	MT1H	P80294	61 aa		0.62	□□□□□ -2.31
HIF1A-210	ENST00000557206	FAT4	Q6V0I7	4981 aa		0.62	□□□□□ -2.31
HIF1A-210	ENST00000557206	MUC17	Q685J3	4493 aa		0.6	□□□□□ -2.31
HIF1A-210	ENST00000557206	FLG	P20930	4061 aa	Predicted RBP	0.59	□□□□□ -2.31
HIF1A-210	ENST00000557206	MT2A	P02795	61 aa		0.59	□□□□□ -2.31
HIF1A-210	ENST00000557206	KRTAP21-1	Q3LI58	79 aa		0.59	□□□□□ -2.31
HIF1A-210	ENST00000557206	SPRR2G	Q9BYE4	73 aa		0.59	□□□□□ -2.31
HIF1A-210	ENST00000557206	MT1F	P04733	61 aa		0.58	□□□□□ -2.32
HIF1A-210	ENST00000557206	KRTAP19-2	Q3LHN2	52 aa		0.58	□□□□□ -2.32
HIF1A-210	ENST00000557206	SYNE2	Q8WXH0	6885 aa	Known RBP	0.58	□□□□□ -2.32
HIF1A-210	ENST00000557206	SPRR2D	P22532	72 aa		0.57	□□□□□ -2.32
HIF1A-210	ENST00000557206	MACF1	Q9UPN3	7388 aa	Known RBP	0.57	□□□□□ -2.32
HIF1A-210	ENST00000557206	KRTAP19-8	Q3LI54	63 aa		0.56	□□□□□ -2.32
HIF1A-210	ENST00000557206	SPRR2B	P35325	72 aa		0.55	□□□□□ -2.32
HIF1A-210	ENST00000557206	USH2A	O75445	5202 aa		0.54	□□□□□ -2.32
HIF1A-210	ENST00000557206	KRTAP8-1	Q8IUC2	63 aa		0.54	□□□□□ -2.32
HIF1A-210	ENST00000557206	MT1B	P07438	61 aa		0.53	□□□□□ -2.32
HIF1A-210	ENST00000557206	KRTAP19-6	Q3LI70	58 aa		0.53	□□□□□ -2.32
HIF1A-210	ENST00000557206	MT1X	P80297	61 aa		0.52	□□□□□ -2.33
HIF1A-210	ENST00000557206	SSPO	A2VEC9	5147 aa		0.52	□□□□□ -2.33
HIF1A-210	ENST00000557206	NEB	P20929	6669 aa		0.51	□□□□□ -2.33
HIF1A-210	ENST00000557206	SPRR2F	Q96RM1	72 aa		0.51	□□□□□ -2.33
HIF1A-210	ENST00000557206	PHGR1	C9JFL3	82 aa		0.5	□□□□□ -2.33
HIF1A-210	ENST00000557206	SPRR2A	P35326	72 aa		0.5	□□□□□ -2.33
HIF1A-210	ENST00000557206	SPRR2E	P22531	72 aa		0.49	□□□□□ -2.33
HIF1A-210	ENST00000557206	MT1A	P04731	61 aa		0.48	□□□□□ -2.33
HIF1A-210	ENST00000557206	KRTAP19-5	Q3LI72	72 aa		0.48	□□□□□ -2.33
HIF1A-210	ENST00000557206	KMT2D	O14686	5537 aa		0.47	□□□□□ -2.33
HIF1A-210	ENST00000557206	MT1E	P04732	61 aa		0.47	□□□□□ -2.33
HIF1A-210	ENST00000557206	MT1G	P13640	62 aa		0.47	□□□□□ -2.33
HIF1A-210	ENST00000557206	DST	Q03001	7570 aa	Known RBP	0.47	□□□□□ -2.33
HIF1A-210	ENST00000557206	MDN1	Q9NU22	5596 aa		0.46	□□□□□ -2.34
HIF1A-210	ENST00000557206	MUC12	Q9UKN1	5478 aa		0.46	□□□□□ -2.34
HIF1A-210	ENST00000557206	KRTAP20-1	Q3LI63	56 aa		0.46	□□□□□ -2.34
HIF1A-210	ENST00000557206	MT1L	Q93083	61 aa		0.46	□□□□□ -2.34
HIF1A-210	ENST00000557206	KRTAP6-2	Q3LI66	62 aa		0.45	□□□□□ -2.34
HIF1A-210	ENST00000557206	KRTAP19-7	Q3SYF9	63 aa		0.45	□□□□□ -2.34
HIF1A-210	ENST00000557206	MT1M	Q8N339	61 aa		0.44	□□□□□ -2.34
HIF1A-210	ENST00000557206	GPR98	Q8WXG9	6306 aa		0.43	□□□□□ -2.34
HIF1A-210	ENST00000557206	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.43	□□□□□ -2.34
HIF1A-210	ENST00000557206	SYNE1	Q8NF91	8797 aa	Known RBP	0.42	□□□□□ -2.34
HIF1A-210	ENST00000557206	AHNAK	Q09666	5890 aa	Known RBP	0.42	□□□□□ -2.34
HIF1A-210	ENST00000557206	MT4	P47944	62 aa		0.41	□□□□□ -2.34
HIF1A-210	ENST00000557206	KRTAP6-1	Q3LI64	71 aa		0.37	□□□□□ -2.35
HIF1A-210	ENST00000557206	KRTAP20-2	Q3LI61	65 aa		0.36	□□□□□ -2.35
HIF1A-210	ENST00000557206	MUC5AC	P98088	5654 aa		0.31	□□□□□ -2.36

Retrieved 78 of 20,778 RNA–protein pairs in 76.1 ms