RNA–Protein interactions for RNA: ENST00000555928.5

MEG3-225, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 720 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-225ENST00000555928 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
MEG3-225ENST00000555928 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
MEG3-225ENST00000555928 Q1T7F1 81 aa5.93□□□□□ -1.46
MEG3-225ENST00000555928 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
MEG3-225ENST00000555928 KRTAP20-2Q3LI61 65 aa5.87□□□□□ -1.47
MEG3-225ENST00000555928 V9GYY9 64 aa5.86□□□□□ -1.47
MEG3-225ENST00000555928 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
MEG3-225ENST00000555928 PSPHP1O15172 72 aa5.78□□□□□ -1.48
MEG3-225ENST00000555928 PRR15LQ9BU68 103 aa5.78□□□□□ -1.48
MEG3-225ENST00000555928 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
MEG3-225ENST00000555928 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
MEG3-225ENST00000555928 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
MEG3-225ENST00000555928 A0A1B0GU69 56 aa5.73□□□□□ -1.49
MEG3-225ENST00000555928 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.5
MEG3-225ENST00000555928 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
MEG3-225ENST00000555928 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
MEG3-225ENST00000555928 SEC61GP60059 68 aa5.66□□□□□ -1.5
MEG3-225ENST00000555928 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
MEG3-225ENST00000555928 A0A1B0GU33 70 aa5.58□□□□□ -1.52
MEG3-225ENST00000555928 A6NED7 52 aa5.58□□□□□ -1.52
MEG3-225ENST00000555928 UQCR11O14957 56 aa5.56□□□□□ -1.52
MEG3-225ENST00000555928 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
MEG3-225ENST00000555928 A8MU10 97 aa5.53□□□□□ -1.52
MEG3-225ENST00000555928 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
MEG3-225ENST00000555928 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
MEG3-225ENST00000555928 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
MEG3-225ENST00000555928 TNP1P09430 55 aa5.51□□□□□ -1.53
MEG3-225ENST00000555928 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
MEG3-225ENST00000555928 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
MEG3-225ENST00000555928 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
MEG3-225ENST00000555928 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
MEG3-225ENST00000555928 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
MEG3-225ENST00000555928 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
MEG3-225ENST00000555928 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
MEG3-225ENST00000555928 KRTAP5-8O75690 187 aa5.34□□□□□ -1.55
MEG3-225ENST00000555928 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
MEG3-225ENST00000555928 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
MEG3-225ENST00000555928 K7ERS5 55 aa5.2□□□□□ -1.58
MEG3-225ENST00000555928 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
MEG3-225ENST00000555928 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
MEG3-225ENST00000555928 MT1AP04731 61 aa5.11□□□□□ -1.59
MEG3-225ENST00000555928 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
MEG3-225ENST00000555928 ROMO1P60602 79 aa5.05□□□□□ -1.6
MEG3-225ENST00000555928 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
MEG3-225ENST00000555928 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
MEG3-225ENST00000555928 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
MEG3-225ENST00000555928 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
MEG3-225ENST00000555928 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
MEG3-225ENST00000555928 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
MEG3-225ENST00000555928 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.62
MEG3-225ENST00000555928 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
MEG3-225ENST00000555928 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
MEG3-225ENST00000555928 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
MEG3-225ENST00000555928 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
MEG3-225ENST00000555928 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
MEG3-225ENST00000555928 MT3P25713 68 aa4.67□□□□□ -1.66
MEG3-225ENST00000555928 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
MEG3-225ENST00000555928 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
MEG3-225ENST00000555928 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
MEG3-225ENST00000555928 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
MEG3-225ENST00000555928 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
MEG3-225ENST00000555928 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
MEG3-225ENST00000555928 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
MEG3-225ENST00000555928 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
MEG3-225ENST00000555928 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
MEG3-225ENST00000555928 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
MEG3-225ENST00000555928 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
MEG3-225ENST00000555928 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
MEG3-225ENST00000555928 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
MEG3-225ENST00000555928 H3BS24 57 aa3.38□□□□□ -1.87
MEG3-225ENST00000555928 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
MEG3-225ENST00000555928 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
MEG3-225ENST00000555928 INE1O15225 51 aa3.21□□□□□ -1.9
MEG3-225ENST00000555928 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
MEG3-225ENST00000555928 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
MEG3-225ENST00000555928 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
MEG3-225ENST00000555928 PRM1P04553 51 aa2.64□□□□□ -1.99
MEG3-225ENST00000555928 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 81.4 ms