RNA–Protein interactions for RNA: ENST00000552431.5

ITGA5-210, Transcript of integrin subunit alpha 5, humanhuman

TSL 3

Gene ITGA5, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-210ENST00000552431 SERP1Q9Y6X1 66 aa3.37□□□□□ -1.87
ITGA5-210ENST00000552431 SEC61GP60059 68 aa3.36□□□□□ -1.87
ITGA5-210ENST00000552431 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
ITGA5-210ENST00000552431 A8MU10 97 aa3.34□□□□□ -1.87
ITGA5-210ENST00000552431 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
ITGA5-210ENST00000552431 A0A1B0GU69 56 aa3.32□□□□□ -1.88
ITGA5-210ENST00000552431 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
ITGA5-210ENST00000552431 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
ITGA5-210ENST00000552431 ATP5EP56381 51 aaPredicted RBP3.3□□□□□ -1.88
ITGA5-210ENST00000552431 TMEM258P61165 79 aa3.28□□□□□ -1.88
ITGA5-210ENST00000552431 H3BS24 57 aa3.27□□□□□ -1.89
ITGA5-210ENST00000552431 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
ITGA5-210ENST00000552431 LINC01558Q9Y6Z2 57 aa3.26□□□□□ -1.89
ITGA5-210ENST00000552431 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
ITGA5-210ENST00000552431 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
ITGA5-210ENST00000552431 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
ITGA5-210ENST00000552431 SMIM26A0A096LP01 95 aa3.23□□□□□ -1.89
ITGA5-210ENST00000552431 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
ITGA5-210ENST00000552431 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
ITGA5-210ENST00000552431 PRR15LQ9BU68 103 aa3.19□□□□□ -1.9
ITGA5-210ENST00000552431 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
ITGA5-210ENST00000552431 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
ITGA5-210ENST00000552431 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
ITGA5-210ENST00000552431 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
ITGA5-210ENST00000552431 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
ITGA5-210ENST00000552431 PSPHP1O15172 72 aa3.13□□□□□ -1.91
ITGA5-210ENST00000552431 UQCR11O14957 56 aa3.12□□□□□ -1.91
ITGA5-210ENST00000552431 MIR22HGQ0VDD5 57 aa3.09□□□□□ -1.91
ITGA5-210ENST00000552431 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
ITGA5-210ENST00000552431 TNP1P09430 55 aa3.08□□□□□ -1.92
ITGA5-210ENST00000552431 Q1T7F1 81 aa3.08□□□□□ -1.92
ITGA5-210ENST00000552431 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
ITGA5-210ENST00000552431 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
ITGA5-210ENST00000552431 SVIPQ8NHG7 77 aa3.06□□□□□ -1.92
ITGA5-210ENST00000552431 PCP4P48539 62 aa3.05□□□□□ -1.92
ITGA5-210ENST00000552431 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
ITGA5-210ENST00000552431 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
ITGA5-210ENST00000552431 V9GYY9 64 aa3.01□□□□□ -1.93
ITGA5-210ENST00000552431 A6NED7 52 aa2.97□□□□□ -1.93
ITGA5-210ENST00000552431 RPS28P62857 69 aaKnown RBP2.94□□□□□ -1.94
ITGA5-210ENST00000552431 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
ITGA5-210ENST00000552431 K7ERS5 55 aa2.92□□□□□ -1.94
ITGA5-210ENST00000552431 MT1AP04731 61 aa2.91□□□□□ -1.94
ITGA5-210ENST00000552431 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
ITGA5-210ENST00000552431 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
ITGA5-210ENST00000552431 CDC42SE1Q9NRR8 79 aa2.84□□□□□ -1.95
ITGA5-210ENST00000552431 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
ITGA5-210ENST00000552431 ROMO1P60602 79 aa2.82□□□□□ -1.96
ITGA5-210ENST00000552431 KRTAP15-1Q3LI76 137 aa2.8□□□□□ -1.96
ITGA5-210ENST00000552431 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
ITGA5-210ENST00000552431 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
ITGA5-210ENST00000552431 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
ITGA5-210ENST00000552431 MT3P25713 68 aa2.7□□□□□ -1.98
ITGA5-210ENST00000552431 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
ITGA5-210ENST00000552431 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
ITGA5-210ENST00000552431 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
ITGA5-210ENST00000552431 A0A0A0MQY5 61 aa2.54□□□□□ -2
ITGA5-210ENST00000552431 PRAC1Q96KF2 57 aa2.46□□□□□ -2.02
ITGA5-210ENST00000552431 PMAIP1Q13794 54 aa2.45□□□□□ -2.02
ITGA5-210ENST00000552431 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
ITGA5-210ENST00000552431 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
ITGA5-210ENST00000552431 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
ITGA5-210ENST00000552431 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
ITGA5-210ENST00000552431 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
ITGA5-210ENST00000552431 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
ITGA5-210ENST00000552431 KTN1-AS1Q86SY8 53 aa2.21□□□□□ -2.06
ITGA5-210ENST00000552431 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
ITGA5-210ENST00000552431 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
ITGA5-210ENST00000552431 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
ITGA5-210ENST00000552431 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
ITGA5-210ENST00000552431 NDUFAF8A1L188 74 aa1.9□□□□□ -2.11
ITGA5-210ENST00000552431 LUZP6Q538Z0 58 aa1.89□□□□□ -2.11
ITGA5-210ENST00000552431 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
ITGA5-210ENST00000552431 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
ITGA5-210ENST00000552431 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
ITGA5-210ENST00000552431 PRM1P04553 51 aa1.49□□□□□ -2.17
ITGA5-210ENST00000552431 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
ITGA5-210ENST00000552431 INE1O15225 51 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms