RNA–Protein interactions for RNA: ENST00000552431.5

ITGA5-210, Transcript of integrin subunit alpha 5, humanhuman

TSL 3

Gene ITGA5, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-210ENST00000552431 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
ITGA5-210ENST00000552431 ABCC9O60706 1549 aa23.22■■□□□ 1.31
ITGA5-210ENST00000552431 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
ITGA5-210ENST00000552431 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
ITGA5-210ENST00000552431 RB1CC1Q8TDY2 1594 aa22■■□□□ 1.11
ITGA5-210ENST00000552431 NACADO15069 1562 aa21.74■■□□□ 1.07
ITGA5-210ENST00000552431 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
ITGA5-210ENST00000552431 PABPN1Q86U42 306 aaKnown RBP eCLIP21.45■■□□□ 1.02
ITGA5-210ENST00000552431 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
ITGA5-210ENST00000552431 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
ITGA5-210ENST00000552431 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
ITGA5-210ENST00000552431 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
ITGA5-210ENST00000552431 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
ITGA5-210ENST00000552431 CC2D2AQ9P2K1 1620 aa21■□□□□ 0.95
ITGA5-210ENST00000552431 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
ITGA5-210ENST00000552431 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.93
ITGA5-210ENST00000552431 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
ITGA5-210ENST00000552431 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
ITGA5-210ENST00000552431 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
ITGA5-210ENST00000552431 CUX2O14529 1486 aa20.32■□□□□ 0.84
ITGA5-210ENST00000552431 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
ITGA5-210ENST00000552431 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
ITGA5-210ENST00000552431 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
ITGA5-210ENST00000552431 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
ITGA5-210ENST00000552431 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
ITGA5-210ENST00000552431 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
ITGA5-210ENST00000552431 NESP48681 1621 aa19.78■□□□□ 0.76
ITGA5-210ENST00000552431 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
ITGA5-210ENST00000552431 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
ITGA5-210ENST00000552431 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
ITGA5-210ENST00000552431 KIF21AQ7Z4S6 1674 aa19.62■□□□□ 0.73
ITGA5-210ENST00000552431 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
ITGA5-210ENST00000552431 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
ITGA5-210ENST00000552431 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
ITGA5-210ENST00000552431 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
ITGA5-210ENST00000552431 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
ITGA5-210ENST00000552431 WDR62O43379 1518 aa19.4■□□□□ 0.7
ITGA5-210ENST00000552431 CADPSQ9ULU8 1353 aa19.36■□□□□ 0.69
ITGA5-210ENST00000552431 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
ITGA5-210ENST00000552431 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
ITGA5-210ENST00000552431 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
ITGA5-210ENST00000552431 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
ITGA5-210ENST00000552431 WIZO95785 1651 aa19.11■□□□□ 0.65
ITGA5-210ENST00000552431 RIMBP3CA6NJZ7 1639 aa19.07■□□□□ 0.64
ITGA5-210ENST00000552431 RIMBP3BA6NNM3 1639 aa19.07■□□□□ 0.64
ITGA5-210ENST00000552431 RIMBP3Q9UFD9 1639 aa19.07■□□□□ 0.64
ITGA5-210ENST00000552431 CFTRP13569 1480 aa19.06■□□□□ 0.64
ITGA5-210ENST00000552431 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
ITGA5-210ENST00000552431 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
ITGA5-210ENST00000552431 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
ITGA5-210ENST00000552431 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
ITGA5-210ENST00000552431 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
ITGA5-210ENST00000552431 ZNF608Q9ULD9 1512 aaPredicted RBP18.82■□□□□ 0.6
ITGA5-210ENST00000552431 EIF4G3O43432 1585 aaKnown RBP18.78■□□□□ 0.6
ITGA5-210ENST00000552431 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
ITGA5-210ENST00000552431 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
ITGA5-210ENST00000552431 CHD1O14646 1710 aa18.75■□□□□ 0.59
ITGA5-210ENST00000552431 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
ITGA5-210ENST00000552431 TRHP20396 242 aaPredicted RBP18.74■□□□□ 0.59
ITGA5-210ENST00000552431 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
ITGA5-210ENST00000552431 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
ITGA5-210ENST00000552431 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
ITGA5-210ENST00000552431 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
ITGA5-210ENST00000552431 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
ITGA5-210ENST00000552431 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
ITGA5-210ENST00000552431 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.561e-6■■■■■ 31.6
ITGA5-210ENST00000552431 FBLN2P98095 1184 aa18.55■□□□□ 0.56
ITGA5-210ENST00000552431 WDR97A6NE52 1622 aa18.52■□□□□ 0.55
ITGA5-210ENST00000552431 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
ITGA5-210ENST00000552431 CLASP1Q7Z460 1538 aa18.5■□□□□ 0.55
ITGA5-210ENST00000552431 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
ITGA5-210ENST00000552431 SNAPC4Q5SXM2 1469 aa18.43■□□□□ 0.54
ITGA5-210ENST00000552431 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
ITGA5-210ENST00000552431 SOGA1O94964 1423 aa18.4■□□□□ 0.54
ITGA5-210ENST00000552431 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.54
ITGA5-210ENST00000552431 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
ITGA5-210ENST00000552431 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
ITGA5-210ENST00000552431 SYNJ2O15056 1496 aa18.34■□□□□ 0.53
ITGA5-210ENST00000552431 GRIN2BQ13224 1484 aa18.34■□□□□ 0.53
ITGA5-210ENST00000552431 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
ITGA5-210ENST00000552431 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
ITGA5-210ENST00000552431 PBRM1Q86U86 1689 aa18.29■□□□□ 0.52
ITGA5-210ENST00000552431 CUX1P39880 1505 aa18.22■□□□□ 0.51
ITGA5-210ENST00000552431 ABCA5Q8WWZ7 1642 aa18.15■□□□□ 0.5
ITGA5-210ENST00000552431 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
ITGA5-210ENST00000552431 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
ITGA5-210ENST00000552431 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
ITGA5-210ENST00000552431 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
ITGA5-210ENST00000552431 ERCC6L2Q5T890 1561 aa18.09■□□□□ 0.49
ITGA5-210ENST00000552431 SHROOM2Q13796 1616 aa18.07■□□□□ 0.48
ITGA5-210ENST00000552431 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
ITGA5-210ENST00000552431 NUP160Q12769 1436 aa18.05■□□□□ 0.48
ITGA5-210ENST00000552431 FHAD1B1AJZ9 1412 aa17.95■□□□□ 0.46
ITGA5-210ENST00000552431 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
ITGA5-210ENST00000552431 ABCC10Q5T3U5 1492 aa17.91■□□□□ 0.46
ITGA5-210ENST00000552431 ERICH3Q5RHP9 1530 aa17.91■□□□□ 0.46
ITGA5-210ENST00000552431 MAPKBP1O60336 1514 aa17.89■□□□□ 0.45
ITGA5-210ENST00000552431 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.45
ITGA5-210ENST00000552431 DIP2BQ9P265 1576 aa17.87■□□□□ 0.45
ITGA5-210ENST00000552431 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms