RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 VPS25Q9BRG1 176 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 UBL5Q9BZL1 73 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 COX6CP09669 75 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HSD52Q0P140 79 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 VAMP8Q9BV40 100 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 TMA7Q9Y2S6 64 aaKnown RBP-0.07□□□□□ -2.42
CEP290-203ENST00000547691 K7ERS5 55 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HIST1H2BKO60814 126 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HIST1H2BDP58876 126 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HIST1H4AP62805 103 aaKnown RBP-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HIST1H2BCP62807 126 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HIST1H2BHQ93079 126 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HIST1H2BNQ99877 126 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 HIST1H2BMQ99879 126 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 FAM240AA0A1B0GVK7 77 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 NDUFA5Q16718 116 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 SPCS1Q9Y6A9 102 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 PRM1P04553 51 aa-0.07□□□□□ -2.42
CEP290-203ENST00000547691 RPS28P62857 69 aaKnown RBP-0.08□□□□□ -2.42
CEP290-203ENST00000547691 MP68P56378 58 aa-0.08□□□□□ -2.42
CEP290-203ENST00000547691 SVBPQ8N300 66 aa-0.08□□□□□ -2.42
CEP290-203ENST00000547691 K7ERJ3 54 aa-0.08□□□□□ -2.42
CEP290-203ENST00000547691 PRAC1Q96KF2 57 aa-0.08□□□□□ -2.42
CEP290-203ENST00000547691 A0A1B0GV72 72 aa-0.09□□□□□ -2.42
CEP290-203ENST00000547691 COA5Q86WW8 74 aa-0.09□□□□□ -2.42
CEP290-203ENST00000547691 SERP1Q9Y6X1 66 aa-0.09□□□□□ -2.42
CEP290-203ENST00000547691 LINC01558Q9Y6Z2 57 aa-0.09□□□□□ -2.42
CEP290-203ENST00000547691 HSBP1L1C9JCN9 74 aa-0.09□□□□□ -2.42
CEP290-203ENST00000547691 SEC61GP60059 68 aa-0.09□□□□□ -2.42
CEP290-203ENST00000547691 CHKB-CPT1BH3BT56 60 aa-0.1□□□□□ -2.42
CEP290-203ENST00000547691 Q1T7F1 81 aa-0.1□□□□□ -2.42
CEP290-203ENST00000547691 SPATA45Q537H7 98 aa-0.1□□□□□ -2.42
CEP290-203ENST00000547691 SMIM20Q8N5G0 67 aa-0.1□□□□□ -2.42
CEP290-203ENST00000547691 ROMO1P60602 79 aa-0.1□□□□□ -2.43
CEP290-203ENST00000547691 TMEM258P61165 79 aa-0.1□□□□□ -2.43
CEP290-203ENST00000547691 A0A1B0GU69 56 aa-0.1□□□□□ -2.43
CEP290-203ENST00000547691 LINC00643Q86TS7 51 aa-0.1□□□□□ -2.43
CEP290-203ENST00000547691 PYY3Q5JQD4 70 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 UQCR10Q9UDW1 63 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 PCP4L1A6NKN8 68 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 C14orf144Q96I85 54 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 SCGB1C2P0DMR2 95 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 F8W1H4 67 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 M0R143 59 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 UQCR11O14957 56 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 CDC42SE1Q9NRR8 79 aa-0.11□□□□□ -2.43
CEP290-203ENST00000547691 APOC3P02656 99 aa-0.12□□□□□ -2.43
CEP290-203ENST00000547691 SERP2Q8N6R1 65 aa-0.12□□□□□ -2.43
CEP290-203ENST00000547691 MIR22HGQ0VDD5 57 aa-0.12□□□□□ -2.43
CEP290-203ENST00000547691 S100A2P29034 98 aa-0.13□□□□□ -2.43
CEP290-203ENST00000547691 ATP5EP56381 51 aaPredicted RBP-0.13□□□□□ -2.43
CEP290-203ENST00000547691 S100A1P23297 94 aa-0.13□□□□□ -2.43
CEP290-203ENST00000547691 A0A0A0MQY5 61 aa-0.14□□□□□ -2.43
CEP290-203ENST00000547691 ETDBQ3ZM63 59 aa-0.14□□□□□ -2.43
CEP290-203ENST00000547691 SMIM6P0DI80 62 aa-0.15□□□□□ -2.43
CEP290-203ENST00000547691 GTF2H5Q6ZYL4 71 aa-0.15□□□□□ -2.43
CEP290-203ENST00000547691 S100A6P06703 90 aa-0.15□□□□□ -2.43
CEP290-203ENST00000547691 COX7CP15954 63 aa-0.15□□□□□ -2.43
CEP290-203ENST00000547691 V9GYY9 64 aa-0.16□□□□□ -2.43
CEP290-203ENST00000547691 COL5A1-AS1Q5SY13 56 aa-0.16□□□□□ -2.44
CEP290-203ENST00000547691 hCG_2014768A0A024R1R8 64 aa-0.16□□□□□ -2.44
CEP290-203ENST00000547691 INE1O15225 51 aa-0.17□□□□□ -2.44
CEP290-203ENST00000547691 KTN1-AS1Q86SY8 53 aa-0.17□□□□□ -2.44
CEP290-203ENST00000547691 CCDC179H3BU77 68 aa-0.17□□□□□ -2.44
CEP290-203ENST00000547691 LOC105371267A0A1B0GV96 52 aa-0.19□□□□□ -2.44
CEP290-203ENST00000547691 J3QR89 54 aa-0.19□□□□□ -2.44
CEP290-203ENST00000547691 SVIPQ8NHG7 77 aa-0.19□□□□□ -2.44
CEP290-203ENST00000547691 A6NED7 52 aa-0.2□□□□□ -2.44
CEP290-203ENST00000547691 PSPHP1O15172 72 aa-0.2□□□□□ -2.44
CEP290-203ENST00000547691 LUZP6Q538Z0 58 aa-0.2□□□□□ -2.44
CEP290-203ENST00000547691 BRK1Q8WUW1 75 aa-0.21□□□□□ -2.44
CEP290-203ENST00000547691 A0A1B0GV90 55 aa-0.22□□□□□ -2.44
CEP290-203ENST00000547691 K7ERU9 68 aa-0.22□□□□□ -2.44
CEP290-203ENST00000547691 ANAPC13Q9BS18 74 aa-0.22□□□□□ -2.44
CEP290-203ENST00000547691 PRO0628Q9UI54 55 aa-0.22□□□□□ -2.44
CEP290-203ENST00000547691 PMAIP1Q13794 54 aa-0.27□□□□□ -2.45
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms