RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 OCR1Q9BZK8 76 aa3.58□□□□□ -1.84
CCDC144NL-203ENST00000539484 PSPHP1O15172 72 aa3.55□□□□□ -1.84
CCDC144NL-203ENST00000539484 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
CCDC144NL-203ENST00000539484 SPTSSBQ8NFR3 76 aa3.54□□□□□ -1.84
CCDC144NL-203ENST00000539484 TRAV7A0A075B6U4 112 aa3.53□□□□□ -1.84
CCDC144NL-203ENST00000539484 ACYP2P14621 99 aa3.52□□□□□ -1.85
CCDC144NL-203ENST00000539484 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
CCDC144NL-203ENST00000539484 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
CCDC144NL-203ENST00000539484 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
CCDC144NL-203ENST00000539484 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
CCDC144NL-203ENST00000539484 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
CCDC144NL-203ENST00000539484 SERP1Q9Y6X1 66 aa3.47□□□□□ -1.85
CCDC144NL-203ENST00000539484 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
CCDC144NL-203ENST00000539484 COX7CP15954 63 aa3.43□□□□□ -1.86
CCDC144NL-203ENST00000539484 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
CCDC144NL-203ENST00000539484 ATP5EP56381 51 aaPredicted RBP3.36□□□□□ -1.87
CCDC144NL-203ENST00000539484 MT1EP04732 61 aa3.35□□□□□ -1.87
CCDC144NL-203ENST00000539484 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
CCDC144NL-203ENST00000539484 CYSTM1Q9H1C7 97 aa3.34□□□□□ -1.87
CCDC144NL-203ENST00000539484 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.88
CCDC144NL-203ENST00000539484 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
CCDC144NL-203ENST00000539484 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
CCDC144NL-203ENST00000539484 A0A0D9SG42 100 aa3.3□□□□□ -1.88
CCDC144NL-203ENST00000539484 SERP2Q8N6R1 65 aa3.3□□□□□ -1.88
CCDC144NL-203ENST00000539484 SNURFQ9Y675 71 aa3.3□□□□□ -1.88
CCDC144NL-203ENST00000539484 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
CCDC144NL-203ENST00000539484 MT1GP13640 62 aa3.29□□□□□ -1.88
CCDC144NL-203ENST00000539484 SPANXA2-OT1Q8N9U9 137 aa3.28□□□□□ -1.88
CCDC144NL-203ENST00000539484 MT4P47944 62 aa3.27□□□□□ -1.89
CCDC144NL-203ENST00000539484 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
CCDC144NL-203ENST00000539484 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
CCDC144NL-203ENST00000539484 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
CCDC144NL-203ENST00000539484 Q1T7F1 81 aa3.25□□□□□ -1.89
CCDC144NL-203ENST00000539484 SPATA8Q6RVD6 105 aa3.22□□□□□ -1.89
CCDC144NL-203ENST00000539484 MT1MQ8N339 61 aa3.21□□□□□ -1.9
CCDC144NL-203ENST00000539484 COA5Q86WW8 74 aa3.2□□□□□ -1.9
CCDC144NL-203ENST00000539484 A0A1B0GU33 70 aa3.19□□□□□ -1.9
CCDC144NL-203ENST00000539484 K7ERS5 55 aa3.19□□□□□ -1.9
CCDC144NL-203ENST00000539484 MT1LQ93083 61 aa3.18□□□□□ -1.9
CCDC144NL-203ENST00000539484 H7BZZ5 65 aa3.17□□□□□ -1.9
CCDC144NL-203ENST00000539484 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
CCDC144NL-203ENST00000539484 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
CCDC144NL-203ENST00000539484 A6NED7 52 aa3.13□□□□□ -1.91
CCDC144NL-203ENST00000539484 TNP1P09430 55 aa3.13□□□□□ -1.91
CCDC144NL-203ENST00000539484 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
CCDC144NL-203ENST00000539484 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
CCDC144NL-203ENST00000539484 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
CCDC144NL-203ENST00000539484 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
CCDC144NL-203ENST00000539484 ROMO1P60602 79 aa3.1□□□□□ -1.91
CCDC144NL-203ENST00000539484 CDC42SE1Q9NRR8 79 aa3.09□□□□□ -1.91
CCDC144NL-203ENST00000539484 A0A1B0GU69 56 aa3.08□□□□□ -1.92
CCDC144NL-203ENST00000539484 A8MU10 97 aa3.06□□□□□ -1.92
CCDC144NL-203ENST00000539484 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
CCDC144NL-203ENST00000539484 KRTAP12-3P60328 96 aa3□□□□□ -1.93
CCDC144NL-203ENST00000539484 MIR22HGQ0VDD5 57 aa2.99□□□□□ -1.93
CCDC144NL-203ENST00000539484 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
CCDC144NL-203ENST00000539484 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
CCDC144NL-203ENST00000539484 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
CCDC144NL-203ENST00000539484 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
CCDC144NL-203ENST00000539484 PRR15LQ9BU68 103 aa2.97□□□□□ -1.93
CCDC144NL-203ENST00000539484 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
CCDC144NL-203ENST00000539484 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
CCDC144NL-203ENST00000539484 UQCR11O14957 56 aa2.84□□□□□ -1.95
CCDC144NL-203ENST00000539484 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
CCDC144NL-203ENST00000539484 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
CCDC144NL-203ENST00000539484 MT1AP04731 61 aa2.72□□□□□ -1.97
CCDC144NL-203ENST00000539484 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
CCDC144NL-203ENST00000539484 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
CCDC144NL-203ENST00000539484 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
CCDC144NL-203ENST00000539484 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
CCDC144NL-203ENST00000539484 MUC5ACP98088 5654 aa2.54□□□□□ -2
CCDC144NL-203ENST00000539484 INE1O15225 51 aa2.54□□□□□ -2
CCDC144NL-203ENST00000539484 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
CCDC144NL-203ENST00000539484 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
CCDC144NL-203ENST00000539484 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
CCDC144NL-203ENST00000539484 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
CCDC144NL-203ENST00000539484 PRM1P04553 51 aa1.26□□□□□ -2.21
CCDC144NL-203ENST00000539484 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms