RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 DCHS1Q96JQ0 3298 aa-1.44□□□□□ -2.64
CCDC7-209ENST00000539197 ADCY10Q96PN6 1610 aa-1.44□□□□□ -2.64
CCDC7-209ENST00000539197 NFAT5O94916 1531 aa-1.46□□□□□ -2.64
CCDC7-209ENST00000539197 TRPM2O94759 1503 aa-1.47□□□□□ -2.64
CCDC7-209ENST00000539197 ABCC8Q09428 1581 aa-1.47□□□□□ -2.65
CCDC7-209ENST00000539197 UNC80Q8N2C7 3258 aa-1.48□□□□□ -2.65
CCDC7-209ENST00000539197 MROH2AA6NES4 1674 aa-1.48□□□□□ -2.65
CCDC7-209ENST00000539197 NRXN3Q9Y4C0 1643 aa-1.48□□□□□ -2.65
CCDC7-209ENST00000539197 WDFY4Q6ZS81 3184 aa-1.49□□□□□ -2.65
CCDC7-209ENST00000539197 IQGAP1P46940 1657 aa-1.49□□□□□ -2.65
CCDC7-209ENST00000539197 FANCD2Q9BXW9 1451 aa-1.5□□□□□ -2.65
CCDC7-209ENST00000539197 NDUFA1O15239 70 aa-1.5□□□□□ -2.65
CCDC7-209ENST00000539197 VCANP13611 3396 aa-1.52□□□□□ -2.65
CCDC7-209ENST00000539197 DDX60Q8IY21 1712 aaKnown RBP-1.52□□□□□ -2.65
CCDC7-209ENST00000539197 FRYLO94915 3013 aa-1.53□□□□□ -2.65
CCDC7-209ENST00000539197 RPS29P62273 56 aaKnown RBP-1.53□□□□□ -2.65
CCDC7-209ENST00000539197 SZT2Q5T011 3432 aa-1.53□□□□□ -2.65
CCDC7-209ENST00000539197 MKI67P46013 3256 aaKnown RBP-1.54□□□□□ -2.66
CCDC7-209ENST00000539197 CEP350Q5VT06 3117 aa-1.54□□□□□ -2.66
CCDC7-209ENST00000539197 CLTCL1P53675 1640 aa-1.55□□□□□ -2.66
CCDC7-209ENST00000539197 WDFY3Q8IZQ1 3526 aa-1.55□□□□□ -2.66
CCDC7-209ENST00000539197 ERICH3Q5RHP9 1530 aa-1.56□□□□□ -2.66
CCDC7-209ENST00000539197 PCNTO95613 3336 aa-1.57□□□□□ -2.66
CCDC7-209ENST00000539197 CEP250Q9BV73 2442 aa-1.62□□□□□ -2.67
CCDC7-209ENST00000539197 USP34Q70CQ2 3546 aa-1.63□□□□□ -2.67
CCDC7-209ENST00000539197 TOMM7Q9P0U1 55 aa-1.63□□□□□ -2.67
CCDC7-209ENST00000539197 SNRPGP15A8MWD9 76 aa-1.64□□□□□ -2.67
CCDC7-209ENST00000539197 MUC3AQ02505 3323 aa-1.66□□□□□ -2.67
CCDC7-209ENST00000539197 DNAH14Q0VDD8 3507 aa-1.66□□□□□ -2.67
CCDC7-209ENST00000539197 MT1FP04733 61 aa-1.67□□□□□ -2.68
CCDC7-209ENST00000539197 DNAH12Q6ZR08 3092 aa-1.69□□□□□ -2.68
CCDC7-209ENST00000539197 LINC01590Q5TEZ4 76 aa-1.72□□□□□ -2.68
CCDC7-209ENST00000539197 CFAP47Q6ZTR5 3102 aa-1.75□□□□□ -2.69
CCDC7-209ENST00000539197 RPL39P62891 51 aaKnown RBP-1.77□□□□□ -2.69
CCDC7-209ENST00000539197 RHPN1-AS1Q9BWJ2 59 aa-1.77□□□□□ -2.69
CCDC7-209ENST00000539197 CDH23Q9H251 3354 aa-1.79□□□□□ -2.7
CCDC7-209ENST00000539197 SAMD9LQ8IVG5 1584 aa-1.81□□□□□ -2.7
CCDC7-209ENST00000539197 BRCA2P51587 3418 aa-1.82□□□□□ -2.7
CCDC7-209ENST00000539197 A0A096LNI7 61 aa-1.82□□□□□ -2.7
CCDC7-209ENST00000539197 DEFB133Q30KQ1 61 aa-1.83□□□□□ -2.7
CCDC7-209ENST00000539197 TOMM5Q8N4H5 51 aa-1.83□□□□□ -2.7
CCDC7-209ENST00000539197 CENPFP49454 3210 aa-1.83□□□□□ -2.7
CCDC7-209ENST00000539197 DUOX1Q9NRD9 1551 aa-1.84□□□□□ -2.7
CCDC7-209ENST00000539197 RPL39LQ96EH5 51 aaKnown RBP-1.86□□□□□ -2.71
CCDC7-209ENST00000539197 TTTY10Q9BZA0 68 aa-1.86□□□□□ -2.71
CCDC7-209ENST00000539197 HTN1P15515 57 aa-1.88□□□□□ -2.71
CCDC7-209ENST00000539197 IQGAP2Q13576 1575 aa-1.89□□□□□ -2.71
CCDC7-209ENST00000539197 XIRP2A4UGR9 3374 aa-1.9□□□□□ -2.71
CCDC7-209ENST00000539197 ASPMQ8IZT6 3477 aa-1.9□□□□□ -2.71
CCDC7-209ENST00000539197 ATP7AQ04656 1500 aa-1.93□□□□□ -2.72
CCDC7-209ENST00000539197 VPS13AQ96RL7 3174 aa-1.93□□□□□ -2.72
CCDC7-209ENST00000539197 DEFB104AQ8WTQ1 72 aa-1.96□□□□□ -2.72
CCDC7-209ENST00000539197 TOP2AP11388 1531 aaKnown RBP-1.97□□□□□ -2.73
CCDC7-209ENST00000539197 UTRNP46939 3433 aa-1.98□□□□□ -2.73
CCDC7-209ENST00000539197 CD52P31358 61 aa-1.99□□□□□ -2.73
CCDC7-209ENST00000539197 DEFB124Q8NES8 71 aa-1.99□□□□□ -2.73
CCDC7-209ENST00000539197 MROH2BQ7Z745 1585 aa-2.06□□□□□ -2.74
CCDC7-209ENST00000539197 GOLGB1Q14789 3259 aaKnown RBP-2.08□□□□□ -2.74
CCDC7-209ENST00000539197 KRTAP19-2Q3LHN2 52 aa-2.11□□□□□ -2.75
CCDC7-209ENST00000539197 H3BUX3 64 aa-2.18□□□□□ -2.76
CCDC7-209ENST00000539197 K7EIM0 57 aa-2.23□□□□□ -2.77
CCDC7-209ENST00000539197 LINC01556Q5JQF7 62 aa-2.23□□□□□ -2.77
CCDC7-209ENST00000539197 ARHGAP5-AS1Q96IT6 56 aa-2.3□□□□□ -2.78
CCDC7-209ENST00000539197 SNRPGP62308 76 aaKnown RBP-2.31□□□□□ -2.78
CCDC7-209ENST00000539197 PRCDQ00LT1 54 aa-2.36□□□□□ -2.79
CCDC7-209ENST00000539197 APELAP0DMC3 54 aa-2.44□□□□□ -2.8
CCDC7-209ENST00000539197 A0A096LPF7 62 aa-2.45□□□□□ -2.8
CCDC7-209ENST00000539197 GCC2Q8IWJ2 1684 aa-2.47□□□□□ -2.8
CCDC7-209ENST00000539197 TMEM167AQ8TBQ9 72 aa-2.51□□□□□ -2.81
CCDC7-209ENST00000539197 H3BSH0 61 aa-2.59□□□□□ -2.82
CCDC7-209ENST00000539197 RPL39P5Q59GN2 51 aa-2.61□□□□□ -2.83
CCDC7-209ENST00000539197 DEFB108AA8MXU0 73 aa-2.67□□□□□ -2.84
CCDC7-209ENST00000539197 HTN3P15516 51 aa-2.68□□□□□ -2.84
CCDC7-209ENST00000539197 Q9Y3F1 56 aa-2.83□□□□□ -2.86
CCDC7-209ENST00000539197 DEFB108BQ8NET1 73 aa-3.05□□□□□ -2.9
CCDC7-209ENST00000539197 COX14Q96I36 57 aa-3.06□□□□□ -2.9
CCDC7-209ENST00000539197 STATHP02808 62 aa-3.46□□□□□ -2.96
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms