RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 BSNQ9UPA5 3926 aa1.33□□□□□ -2.2
SOX6-217ENST00000533870 DMDP11532 3685 aa1.33□□□□□ -2.2
SOX6-217ENST00000533870 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
SOX6-217ENST00000533870 KRTAP4-9Q9BYQ8 210 aa1.31□□□□□ -2.2
SOX6-217ENST00000533870 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
SOX6-217ENST00000533870 KRTAP2-2Q9BYT5 123 aa1.31□□□□□ -2.2
SOX6-217ENST00000533870 CSMD3Q7Z407 3707 aa1.31□□□□□ -2.2
SOX6-217ENST00000533870 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
SOX6-217ENST00000533870 ANK2Q01484 3957 aa1.3□□□□□ -2.2
SOX6-217ENST00000533870 DNAH3Q8TD57 4116 aa1.3□□□□□ -2.2
SOX6-217ENST00000533870 SMG1Q96Q15 3661 aaKnown RBP1.29□□□□□ -2.2
SOX6-217ENST00000533870 KRTAP19-6Q3LI70 58 aa1.28□□□□□ -2.2
SOX6-217ENST00000533870 MT1AP04731 61 aa1.28□□□□□ -2.2
SOX6-217ENST00000533870 LAMA5O15230 3695 aa1.27□□□□□ -2.21
SOX6-217ENST00000533870 MT1MQ8N339 61 aa1.27□□□□□ -2.21
SOX6-217ENST00000533870 LCE1AQ5T7P2 110 aa1.27□□□□□ -2.21
SOX6-217ENST00000533870 LPAP08519 4548 aa1.26□□□□□ -2.21
SOX6-217ENST00000533870 SPRR2AP35326 72 aa1.25□□□□□ -2.21
SOX6-217ENST00000533870 MT3P25713 68 aa1.24□□□□□ -2.21
SOX6-217ENST00000533870 CRCT1Q9UGL9 99 aa1.24□□□□□ -2.21
SOX6-217ENST00000533870 NBPF19A0A087WUL8 3843 aa1.24□□□□□ -2.21
SOX6-217ENST00000533870 FCGBPQ9Y6R7 5405 aaPredicted RBP1.24□□□□□ -2.21
SOX6-217ENST00000533870 TRRAPQ9Y4A5 3859 aa1.23□□□□□ -2.21
SOX6-217ENST00000533870 LCE1EQ5T753 118 aa1.23□□□□□ -2.21
SOX6-217ENST00000533870 SPRR2BP35325 72 aa1.22□□□□□ -2.21
SOX6-217ENST00000533870 SPRR2FQ96RM1 72 aa1.22□□□□□ -2.21
SOX6-217ENST00000533870 KRTAP9-6A8MVA2 160 aa1.21□□□□□ -2.22
SOX6-217ENST00000533870 CSMD1Q96PZ7 3565 aa1.21□□□□□ -2.22
SOX6-217ENST00000533870 SVEP1Q4LDE5 3571 aa1.2□□□□□ -2.22
SOX6-217ENST00000533870 DNAH6Q9C0G6 4158 aa1.2□□□□□ -2.22
SOX6-217ENST00000533870 PKHD1P08F94 4074 aa1.2□□□□□ -2.22
SOX6-217ENST00000533870 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
SOX6-217ENST00000533870 FSIP2Q5CZC0 6907 aa1.19□□□□□ -2.22
SOX6-217ENST00000533870 FRAS1Q86XX4 4008 aa1.18□□□□□ -2.22
SOX6-217ENST00000533870 NEBP20929 6669 aa1.18□□□□□ -2.22
SOX6-217ENST00000533870 CMYA5Q8N3K9 4069 aa1.17□□□□□ -2.22
SOX6-217ENST00000533870 SPRR2EP22531 72 aa1.17□□□□□ -2.22
SOX6-217ENST00000533870 LYSTQ99698 3801 aa1.17□□□□□ -2.22
SOX6-217ENST00000533870 DSTQ03001 7570 aaKnown RBP1.15□□□□□ -2.23
SOX6-217ENST00000533870 KRTAP5-9P26371 169 aa1.15□□□□□ -2.23
SOX6-217ENST00000533870 ZNF469Q96JG9 3925 aaPredicted RBP1.14□□□□□ -2.23
SOX6-217ENST00000533870 FLGP20930 4061 aaPredicted RBP1.14□□□□□ -2.23
SOX6-217ENST00000533870 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
SOX6-217ENST00000533870 PRM1P04553 51 aa1.13□□□□□ -2.23
SOX6-217ENST00000533870 PRKDCP78527 4128 aaKnown RBP1.12□□□□□ -2.23
SOX6-217ENST00000533870 VPS13BQ7Z7G8 4022 aa1.12□□□□□ -2.23
SOX6-217ENST00000533870 KMT2AQ03164 3969 aa1.12□□□□□ -2.23
SOX6-217ENST00000533870 DNAH7Q8WXX0 4024 aa1.11□□□□□ -2.23
SOX6-217ENST00000533870 TNXBP22105 4242 aa1.11□□□□□ -2.23
SOX6-217ENST00000533870 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
SOX6-217ENST00000533870 SPRR2DP22532 72 aa1.1□□□□□ -2.23
SOX6-217ENST00000533870 HECTD4Q9Y4D8 3996 aa1.1□□□□□ -2.23
SOX6-217ENST00000533870 PKHD1L1Q86WI1 4243 aa1.1□□□□□ -2.23
SOX6-217ENST00000533870 VPS13CQ709C8 3753 aa1.09□□□□□ -2.23
SOX6-217ENST00000533870 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
SOX6-217ENST00000533870 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
SOX6-217ENST00000533870 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
SOX6-217ENST00000533870 KRTAP6-3Q3LI67 103 aa1.06□□□□□ -2.24
SOX6-217ENST00000533870 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
SOX6-217ENST00000533870 KRTAP5-11Q6L8G4 156 aa1.05□□□□□ -2.24
SOX6-217ENST00000533870 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
SOX6-217ENST00000533870 AKAP9Q99996 3911 aa1.02□□□□□ -2.25
SOX6-217ENST00000533870 KRTAP4-3Q9BYR4 195 aa1.02□□□□□ -2.25
SOX6-217ENST00000533870 KRTAP5-5Q701N2 237 aaPredicted RBP0.96□□□□□ -2.26
SOX6-217ENST00000533870 KRTAP5-1Q6L8H4 278 aa0.96□□□□□ -2.26
SOX6-217ENST00000533870 KRTAP4-4Q9BYR3 166 aa0.94□□□□□ -2.26
SOX6-217ENST00000533870 KRTAP5-8O75690 187 aa0.93□□□□□ -2.26
SOX6-217ENST00000533870 KRTAP20-1Q3LI63 56 aa0.92□□□□□ -2.26
SOX6-217ENST00000533870 LCE1BQ5T7P3 118 aa0.87□□□□□ -2.27
SOX6-217ENST00000533870 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
SOX6-217ENST00000533870 MT4P47944 62 aa0.85□□□□□ -2.27
SOX6-217ENST00000533870 LCE1CQ5T751 118 aa0.85□□□□□ -2.27
SOX6-217ENST00000533870 KRTAP5-7Q6L8G8 165 aa0.84□□□□□ -2.27
SOX6-217ENST00000533870 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
SOX6-217ENST00000533870 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
SOX6-217ENST00000533870 KRTAP21-2Q3LI59 83 aa0.65□□□□□ -2.31
SOX6-217ENST00000533870 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
SOX6-217ENST00000533870 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms