RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 ETDBQ3ZM63 59 aa3.42□□□□□ -1.86
GEN1-205ENST00000532257 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
GEN1-205ENST00000532257 TRAV7A0A075B6U4 112 aa3.4□□□□□ -1.87
GEN1-205ENST00000532257 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
GEN1-205ENST00000532257 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
GEN1-205ENST00000532257 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
GEN1-205ENST00000532257 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
GEN1-205ENST00000532257 F8W1H4 67 aa3.36□□□□□ -1.87
GEN1-205ENST00000532257 K7ERU9 68 aa3.36□□□□□ -1.87
GEN1-205ENST00000532257 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
GEN1-205ENST00000532257 H3BPC8 53 aa3.35□□□□□ -1.87
GEN1-205ENST00000532257 GTF2H5Q6ZYL4 71 aa3.35□□□□□ -1.87
GEN1-205ENST00000532257 ACYP2P14621 99 aa3.34□□□□□ -1.87
GEN1-205ENST00000532257 SCGB1A1P11684 91 aa3.33□□□□□ -1.88
GEN1-205ENST00000532257 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
GEN1-205ENST00000532257 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
GEN1-205ENST00000532257 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
GEN1-205ENST00000532257 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
GEN1-205ENST00000532257 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
GEN1-205ENST00000532257 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
GEN1-205ENST00000532257 J3QR89 54 aa3.27□□□□□ -1.89
GEN1-205ENST00000532257 LINC00643Q86TS7 51 aa3.27□□□□□ -1.89
GEN1-205ENST00000532257 SPINT4Q6UDR6 99 aa3.26□□□□□ -1.89
GEN1-205ENST00000532257 A8MU10 97 aa3.24□□□□□ -1.89
GEN1-205ENST00000532257 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
GEN1-205ENST00000532257 SEC61GP60059 68 aa3.23□□□□□ -1.89
GEN1-205ENST00000532257 SPATA8Q6RVD6 105 aa3.17□□□□□ -1.9
GEN1-205ENST00000532257 KRTAP12-1P59990 96 aa3.15□□□□□ -1.91
GEN1-205ENST00000532257 TNP1P09430 55 aa3.13□□□□□ -1.91
GEN1-205ENST00000532257 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
GEN1-205ENST00000532257 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
GEN1-205ENST00000532257 ANAPC13Q9BS18 74 aa3.1□□□□□ -1.91
GEN1-205ENST00000532257 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
GEN1-205ENST00000532257 A0A1B0GU33 70 aa3.06□□□□□ -1.92
GEN1-205ENST00000532257 SNURFQ9Y675 71 aa3.03□□□□□ -1.92
GEN1-205ENST00000532257 RPS28P62857 69 aaKnown RBP3.02□□□□□ -1.93
GEN1-205ENST00000532257 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
GEN1-205ENST00000532257 SMIM20Q8N5G0 67 aa3.01□□□□□ -1.93
GEN1-205ENST00000532257 SPANXA2-OT1Q8N9U9 137 aa3□□□□□ -1.93
GEN1-205ENST00000532257 CCDC179H3BU77 68 aa2.99□□□□□ -1.93
GEN1-205ENST00000532257 SMIM26A0A096LP01 95 aa2.98□□□□□ -1.93
GEN1-205ENST00000532257 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
GEN1-205ENST00000532257 COA5Q86WW8 74 aa2.98□□□□□ -1.93
GEN1-205ENST00000532257 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
GEN1-205ENST00000532257 COX7CP15954 63 aa2.95□□□□□ -1.94
GEN1-205ENST00000532257 TMEM258P61165 79 aa2.95□□□□□ -1.94
GEN1-205ENST00000532257 MT1AP04731 61 aa2.93□□□□□ -1.94
GEN1-205ENST00000532257 SERP2Q8N6R1 65 aa2.91□□□□□ -1.94
GEN1-205ENST00000532257 ATP5EP56381 51 aaPredicted RBP2.87□□□□□ -1.95
GEN1-205ENST00000532257 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
GEN1-205ENST00000532257 A0A1B0GU69 56 aa2.85□□□□□ -1.95
GEN1-205ENST00000532257 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
GEN1-205ENST00000532257 H7BZZ5 65 aa2.79□□□□□ -1.96
GEN1-205ENST00000532257 V9GYY9 64 aa2.77□□□□□ -1.97
GEN1-205ENST00000532257 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
GEN1-205ENST00000532257 Q1T7F1 81 aa2.7□□□□□ -1.98
GEN1-205ENST00000532257 PMAIP1Q13794 54 aa2.69□□□□□ -1.98
GEN1-205ENST00000532257 PRR15LQ9BU68 103 aa2.67□□□□□ -1.98
GEN1-205ENST00000532257 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
GEN1-205ENST00000532257 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
GEN1-205ENST00000532257 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
GEN1-205ENST00000532257 PSPHP1O15172 72 aa2.59□□□□□ -1.99
GEN1-205ENST00000532257 LUZP6Q538Z0 58 aa2.55□□□□□ -2
GEN1-205ENST00000532257 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
GEN1-205ENST00000532257 CDC42SE1Q9NRR8 79 aa2.55□□□□□ -2
GEN1-205ENST00000532257 A6NED7 52 aa2.52□□□□□ -2.01
GEN1-205ENST00000532257 UQCR11O14957 56 aa2.52□□□□□ -2.01
GEN1-205ENST00000532257 LINC01558Q9Y6Z2 57 aa2.52□□□□□ -2.01
GEN1-205ENST00000532257 K7ERS5 55 aa2.49□□□□□ -2.01
GEN1-205ENST00000532257 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
GEN1-205ENST00000532257 MIR22HGQ0VDD5 57 aa2.45□□□□□ -2.02
GEN1-205ENST00000532257 ROMO1P60602 79 aa2.26□□□□□ -2.05
GEN1-205ENST00000532257 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
GEN1-205ENST00000532257 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
GEN1-205ENST00000532257 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
GEN1-205ENST00000532257 INE1O15225 51 aa1.79□□□□□ -2.12
GEN1-205ENST00000532257 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
GEN1-205ENST00000532257 PRM1P04553 51 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms