RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
GEN1-205ENST00000532257 ABCC9O60706 1549 aa25.39■■□□□ 1.66
GEN1-205ENST00000532257 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
GEN1-205ENST00000532257 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.5
GEN1-205ENST00000532257 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
GEN1-205ENST00000532257 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
GEN1-205ENST00000532257 DNAJC5Q9H3Z4 198 aa23.39■■□□□ 1.33
GEN1-205ENST00000532257 NACADO15069 1562 aa23.26■■□□□ 1.31
GEN1-205ENST00000532257 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
GEN1-205ENST00000532257 BICRAQ9NZM4 1560 aa23.07■■□□□ 1.28
GEN1-205ENST00000532257 CECR2Q9BXF3 1484 aa22.96■■□□□ 1.27
GEN1-205ENST00000532257 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
GEN1-205ENST00000532257 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
GEN1-205ENST00000532257 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
GEN1-205ENST00000532257 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
GEN1-205ENST00000532257 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
GEN1-205ENST00000532257 CUX2O14529 1486 aa22.28■■□□□ 1.16
GEN1-205ENST00000532257 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
GEN1-205ENST00000532257 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
GEN1-205ENST00000532257 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
GEN1-205ENST00000532257 DCAF1Q9Y4B6 1507 aa21.91■■□□□ 1.1
GEN1-205ENST00000532257 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
GEN1-205ENST00000532257 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
GEN1-205ENST00000532257 THOC2Q8NI27 1593 aaKnown RBP21.55■■□□□ 1.04
GEN1-205ENST00000532257 NESP48681 1621 aa21.52■■□□□ 1.04
GEN1-205ENST00000532257 NCAPD3P42695 1498 aa21.45■■□□□ 1.03
GEN1-205ENST00000532257 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
GEN1-205ENST00000532257 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
GEN1-205ENST00000532257 HMGXB3Q12766 1538 aa21.26■□□□□ 0.99
GEN1-205ENST00000532257 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
GEN1-205ENST00000532257 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
GEN1-205ENST00000532257 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
GEN1-205ENST00000532257 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
GEN1-205ENST00000532257 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
GEN1-205ENST00000532257 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
GEN1-205ENST00000532257 OSCARQ8IYS5 282 aa21.01■□□□□ 0.95
GEN1-205ENST00000532257 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
GEN1-205ENST00000532257 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
GEN1-205ENST00000532257 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
GEN1-205ENST00000532257 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
GEN1-205ENST00000532257 WDR62O43379 1518 aa20.98■□□□□ 0.95
GEN1-205ENST00000532257 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
GEN1-205ENST00000532257 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
GEN1-205ENST00000532257 CADPSQ9ULU8 1353 aa20.75■□□□□ 0.91
GEN1-205ENST00000532257 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
GEN1-205ENST00000532257 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
GEN1-205ENST00000532257 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
GEN1-205ENST00000532257 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
GEN1-205ENST00000532257 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
GEN1-205ENST00000532257 ARAP1Q96P48 1450 aa20.53■□□□□ 0.88
GEN1-205ENST00000532257 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
GEN1-205ENST00000532257 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
GEN1-205ENST00000532257 ZNF608Q9ULD9 1512 aaPredicted RBP20.4■□□□□ 0.86
GEN1-205ENST00000532257 CHD1O14646 1710 aa20.33■□□□□ 0.85
GEN1-205ENST00000532257 CFTRP13569 1480 aa20.32■□□□□ 0.84
GEN1-205ENST00000532257 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
GEN1-205ENST00000532257 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
GEN1-205ENST00000532257 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
GEN1-205ENST00000532257 WIZO95785 1651 aa20.26■□□□□ 0.83
GEN1-205ENST00000532257 ILDR1Q86SU0 546 aaPredicted RBP20.2■□□□□ 0.82
GEN1-205ENST00000532257 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
GEN1-205ENST00000532257 FBLN2P98095 1184 aa20.1■□□□□ 0.81
GEN1-205ENST00000532257 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
GEN1-205ENST00000532257 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.8
GEN1-205ENST00000532257 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
GEN1-205ENST00000532257 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
GEN1-205ENST00000532257 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
GEN1-205ENST00000532257 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
GEN1-205ENST00000532257 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
GEN1-205ENST00000532257 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
GEN1-205ENST00000532257 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
GEN1-205ENST00000532257 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
GEN1-205ENST00000532257 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
GEN1-205ENST00000532257 KIF13AQ9H1H9 1805 aa19.78■□□□□ 0.76
GEN1-205ENST00000532257 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
GEN1-205ENST00000532257 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
GEN1-205ENST00000532257 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
GEN1-205ENST00000532257 KDM4FA0A1W2PPD8 638 aa19.73■□□□□ 0.75
GEN1-205ENST00000532257 MAGI1Q96QZ7 1491 aaPredicted RBP19.73■□□□□ 0.75
GEN1-205ENST00000532257 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
GEN1-205ENST00000532257 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
GEN1-205ENST00000532257 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
GEN1-205ENST00000532257 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
GEN1-205ENST00000532257 SOGA1O94964 1423 aa19.64■□□□□ 0.73
GEN1-205ENST00000532257 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
GEN1-205ENST00000532257 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
GEN1-205ENST00000532257 KDM6BO15054 1643 aa19.53■□□□□ 0.72
GEN1-205ENST00000532257 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
GEN1-205ENST00000532257 CEP170Q5SW79 1584 aa19.5■□□□□ 0.71
GEN1-205ENST00000532257 HECW2Q9P2P5 1572 aa19.48■□□□□ 0.71
GEN1-205ENST00000532257 ABCC10Q5T3U5 1492 aa19.46■□□□□ 0.71
GEN1-205ENST00000532257 FAM69CQ0P6D2 419 aa19.45■□□□□ 0.7
GEN1-205ENST00000532257 DIP2BQ9P265 1576 aa19.44■□□□□ 0.7
GEN1-205ENST00000532257 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
GEN1-205ENST00000532257 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
GEN1-205ENST00000532257 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
GEN1-205ENST00000532257 TSPOAP1O95153 1857 aa19.37■□□□□ 0.69
GEN1-205ENST00000532257 CUX1P39880 1505 aa19.35■□□□□ 0.69
GEN1-205ENST00000532257 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
GEN1-205ENST00000532257 NUP160Q12769 1436 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms