RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 A0A096LPF7 62 aa0.24□□□□□ -2.37
PCM1-219ENST00000523540 RPS29P62273 56 aaKnown RBP0.24□□□□□ -2.37
PCM1-219ENST00000523540 DYNC1H1Q14204 4646 aaKnown RBP0.24□□□□□ -2.37
PCM1-219ENST00000523540 DNAH5Q8TE73 4624 aa0.24□□□□□ -2.37
PCM1-219ENST00000523540 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
PCM1-219ENST00000523540 EYSQ5T1H1 3165 aa0.23□□□□□ -2.37
PCM1-219ENST00000523540 GPR98Q8WXG9 6306 aa0.23□□□□□ -2.37
PCM1-219ENST00000523540 FAT1Q14517 4588 aa0.23□□□□□ -2.37
PCM1-219ENST00000523540 LINC01556Q5JQF7 62 aa0.23□□□□□ -2.37
PCM1-219ENST00000523540 DEFB108BQ8NET1 73 aa0.23□□□□□ -2.37
PCM1-219ENST00000523540 USP34Q70CQ2 3546 aa0.23□□□□□ -2.37
PCM1-219ENST00000523540 STARD9Q9P2P6 4700 aa0.23□□□□□ -2.37
PCM1-219ENST00000523540 HERC1Q15751 4861 aa0.22□□□□□ -2.37
PCM1-219ENST00000523540 MYO15AQ9UKN7 3530 aa0.22□□□□□ -2.37
PCM1-219ENST00000523540 LRP2P98164 4655 aa0.22□□□□□ -2.37
PCM1-219ENST00000523540 LOC400499M0QZD8 3231 aa0.22□□□□□ -2.37
PCM1-219ENST00000523540 UNC80Q8N2C7 3258 aa0.21□□□□□ -2.38
PCM1-219ENST00000523540 UTRNP46939 3433 aa0.21□□□□□ -2.38
PCM1-219ENST00000523540 CD52P31358 61 aa0.21□□□□□ -2.38
PCM1-219ENST00000523540 COX14Q96I36 57 aa0.21□□□□□ -2.38
PCM1-219ENST00000523540 Q9Y3F1 56 aa0.21□□□□□ -2.38
PCM1-219ENST00000523540 EP400Q96L91 3159 aa0.21□□□□□ -2.38
PCM1-219ENST00000523540 VPS13AQ96RL7 3174 aa0.21□□□□□ -2.38
PCM1-219ENST00000523540 ASPMQ8IZT6 3477 aa0.21□□□□□ -2.38
PCM1-219ENST00000523540 SSPOA2VEC9 5147 aa0.2□□□□□ -2.38
PCM1-219ENST00000523540 DNHD1Q96M86 4753 aa0.2□□□□□ -2.38
PCM1-219ENST00000523540 MUC17Q685J3 4493 aa0.2□□□□□ -2.38
PCM1-219ENST00000523540 PCLOQ9Y6V0 5065 aa0.2□□□□□ -2.38
PCM1-219ENST00000523540 PCNTO95613 3336 aa0.2□□□□□ -2.38
PCM1-219ENST00000523540 WDFY3Q8IZQ1 3526 aa0.18□□□□□ -2.38
PCM1-219ENST00000523540 DEFB4AO15263 64 aa0.18□□□□□ -2.38
PCM1-219ENST00000523540 MT1EP04732 61 aa0.18□□□□□ -2.38
PCM1-219ENST00000523540 MT1HP80294 61 aa0.18□□□□□ -2.38
PCM1-219ENST00000523540 SPEGQ15772 3267 aa0.18□□□□□ -2.38
PCM1-219ENST00000523540 KMT2CQ8NEZ4 4911 aaKnown RBP0.18□□□□□ -2.38
PCM1-219ENST00000523540 BRCA2P51587 3418 aa0.17□□□□□ -2.38
PCM1-219ENST00000523540 UBR4Q5T4S7 5183 aa0.17□□□□□ -2.38
PCM1-219ENST00000523540 DNAH14Q0VDD8 3507 aa0.16□□□□□ -2.38
PCM1-219ENST00000523540 HTN3P15516 51 aa0.15□□□□□ -2.39
PCM1-219ENST00000523540 MT1LQ93083 61 aa0.15□□□□□ -2.39
PCM1-219ENST00000523540 GOLGB1Q14789 3259 aaKnown RBP0.13□□□□□ -2.39
PCM1-219ENST00000523540 MT1XP80297 61 aa0.13□□□□□ -2.39
PCM1-219ENST00000523540 USH2AO75445 5202 aa0.13□□□□□ -2.39
PCM1-219ENST00000523540 SYNE2Q8WXH0 6885 aaKnown RBP0.12□□□□□ -2.39
PCM1-219ENST00000523540 CENPFP49454 3210 aa0.11□□□□□ -2.39
PCM1-219ENST00000523540 VCANP13611 3396 aa0.11□□□□□ -2.39
PCM1-219ENST00000523540 MUC2Q02817 5179 aa0.11□□□□□ -2.39
PCM1-219ENST00000523540 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
PCM1-219ENST00000523540 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
PCM1-219ENST00000523540 EPPK1P58107 5090 aaKnown RBP0.1□□□□□ -2.39
PCM1-219ENST00000523540 RYR1P21817 5038 aa0.1□□□□□ -2.39
PCM1-219ENST00000523540 KRTAP19-7Q3SYF9 63 aa0.09□□□□□ -2.4
PCM1-219ENST00000523540 BIRC6Q9NR09 4857 aa0.08□□□□□ -2.4
PCM1-219ENST00000523540 MT1GP13640 62 aa0.08□□□□□ -2.4
PCM1-219ENST00000523540 KRTAP19-8Q3LI54 63 aa0.08□□□□□ -2.4
PCM1-219ENST00000523540 RNF213Q63HN8 5207 aa0.08□□□□□ -2.4
PCM1-219ENST00000523540 KRTAP6-1Q3LI64 71 aa0.07□□□□□ -2.4
PCM1-219ENST00000523540 HERC2O95714 4834 aa0.07□□□□□ -2.4
PCM1-219ENST00000523540 KIAA1109Q2LD37 5005 aa0.07□□□□□ -2.4
PCM1-219ENST00000523540 HYDINQ4G0P3 5121 aa0.06□□□□□ -2.4
PCM1-219ENST00000523540 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
PCM1-219ENST00000523540 MT2AP02795 61 aa0.05□□□□□ -2.4
PCM1-219ENST00000523540 MT1MQ8N339 61 aa0.05□□□□□ -2.4
PCM1-219ENST00000523540 CDH23Q9H251 3354 aa0.05□□□□□ -2.4
PCM1-219ENST00000523540 MT1HL1P0DM35 61 aa0.04□□□□□ -2.4
PCM1-219ENST00000523540 RYR3Q15413 4870 aa0.04□□□□□ -2.4
PCM1-219ENST00000523540 MT1BP07438 61 aa0□□□□□ -2.41
PCM1-219ENST00000523540 ABCA13Q86UQ4 5058 aa0□□□□□ -2.41
PCM1-219ENST00000523540 RYR2Q92736 4967 aa-0.01□□□□□ -2.41
PCM1-219ENST00000523540 MT4P47944 62 aa-0.01□□□□□ -2.41
PCM1-219ENST00000523540 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
PCM1-219ENST00000523540 KRTAP19-2Q3LHN2 52 aa-0.03□□□□□ -2.41
PCM1-219ENST00000523540 MT1FP04733 61 aa-0.04□□□□□ -2.42
PCM1-219ENST00000523540 MACF1Q9UPN3 7388 aaKnown RBP-0.05□□□□□ -2.42
PCM1-219ENST00000523540 DSTQ03001 7570 aaKnown RBP-0.05□□□□□ -2.42
PCM1-219ENST00000523540 NEBP20929 6669 aa-0.17□□□□□ -2.44
PCM1-219ENST00000523540 KRTAP20-1Q3LI63 56 aa-0.23□□□□□ -2.45
PCM1-219ENST00000523540 KRTAP19-6Q3LI70 58 aa-0.24□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 75.3 ms