RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 K7ERU9 68 aa3.57□□□□□ -1.84
POLB-212ENST00000522297 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
POLB-212ENST00000522297 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
POLB-212ENST00000522297 SPTSSBQ8NFR3 76 aa3.56□□□□□ -1.84
POLB-212ENST00000522297 SNURFQ9Y675 71 aa3.55□□□□□ -1.84
POLB-212ENST00000522297 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
POLB-212ENST00000522297 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
POLB-212ENST00000522297 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
POLB-212ENST00000522297 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
POLB-212ENST00000522297 SPRR2DP22532 72 aa3.47□□□□□ -1.85
POLB-212ENST00000522297 SERP2Q8N6R1 65 aa3.47□□□□□ -1.85
POLB-212ENST00000522297 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
POLB-212ENST00000522297 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
POLB-212ENST00000522297 SPINT4Q6UDR6 99 aa3.39□□□□□ -1.87
POLB-212ENST00000522297 COA5Q86WW8 74 aa3.39□□□□□ -1.87
POLB-212ENST00000522297 A0A1B0GU33 70 aa3.38□□□□□ -1.87
POLB-212ENST00000522297 COX7CP15954 63 aa3.35□□□□□ -1.87
POLB-212ENST00000522297 A0A0D9SG42 100 aa3.34□□□□□ -1.87
POLB-212ENST00000522297 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.87
POLB-212ENST00000522297 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
POLB-212ENST00000522297 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
POLB-212ENST00000522297 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
POLB-212ENST00000522297 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
POLB-212ENST00000522297 CYSTM1Q9H1C7 97 aa3.32□□□□□ -1.88
POLB-212ENST00000522297 H7BZZ5 65 aa3.31□□□□□ -1.88
POLB-212ENST00000522297 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
POLB-212ENST00000522297 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
POLB-212ENST00000522297 KRTAP12-1P59990 96 aa3.26□□□□□ -1.89
POLB-212ENST00000522297 MT1EP04732 61 aa3.25□□□□□ -1.89
POLB-212ENST00000522297 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
POLB-212ENST00000522297 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
POLB-212ENST00000522297 A0A1B0GU69 56 aa3.22□□□□□ -1.89
POLB-212ENST00000522297 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
POLB-212ENST00000522297 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
POLB-212ENST00000522297 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
POLB-212ENST00000522297 TMEM258P61165 79 aa3.19□□□□□ -1.9
POLB-212ENST00000522297 CCDC179H3BU77 68 aa3.17□□□□□ -1.9
POLB-212ENST00000522297 MT1GP13640 62 aa3.15□□□□□ -1.91
POLB-212ENST00000522297 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
POLB-212ENST00000522297 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
POLB-212ENST00000522297 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
POLB-212ENST00000522297 ROMO1P60602 79 aa3.12□□□□□ -1.91
POLB-212ENST00000522297 MT1LQ93083 61 aa3.11□□□□□ -1.91
POLB-212ENST00000522297 TNP1P09430 55 aa3.1□□□□□ -1.91
POLB-212ENST00000522297 MT4P47944 62 aa3.1□□□□□ -1.91
POLB-212ENST00000522297 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
POLB-212ENST00000522297 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
POLB-212ENST00000522297 ATP5EP56381 51 aaPredicted RBP3.09□□□□□ -1.91
POLB-212ENST00000522297 MT1MQ8N339 61 aa3.09□□□□□ -1.91
POLB-212ENST00000522297 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
POLB-212ENST00000522297 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
POLB-212ENST00000522297 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
POLB-212ENST00000522297 UQCR11O14957 56 aa3.01□□□□□ -1.93
POLB-212ENST00000522297 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
POLB-212ENST00000522297 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
POLB-212ENST00000522297 Q1T7F1 81 aa2.95□□□□□ -1.94
POLB-212ENST00000522297 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
POLB-212ENST00000522297 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
POLB-212ENST00000522297 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
POLB-212ENST00000522297 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
POLB-212ENST00000522297 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
POLB-212ENST00000522297 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
POLB-212ENST00000522297 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
POLB-212ENST00000522297 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
POLB-212ENST00000522297 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
POLB-212ENST00000522297 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
POLB-212ENST00000522297 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
POLB-212ENST00000522297 INE1O15225 51 aa2.67□□□□□ -1.98
POLB-212ENST00000522297 MT1AP04731 61 aa2.63□□□□□ -1.99
POLB-212ENST00000522297 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
POLB-212ENST00000522297 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
POLB-212ENST00000522297 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
POLB-212ENST00000522297 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
POLB-212ENST00000522297 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
POLB-212ENST00000522297 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
POLB-212ENST00000522297 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
POLB-212ENST00000522297 PRM1P04553 51 aa1.37□□□□□ -2.19
POLB-212ENST00000522297 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms