RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 SPTSSBQ8NFR3 76 aa2.4□□□□□ -2.03
SPIDR-216ENST00000521918 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
SPIDR-216ENST00000521918 LINC01554Q52M75 96 aa2.39□□□□□ -2.03
SPIDR-216ENST00000521918 CHKB-CPT1BH3BT56 60 aa2.38□□□□□ -2.03
SPIDR-216ENST00000521918 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
SPIDR-216ENST00000521918 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
SPIDR-216ENST00000521918 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
SPIDR-216ENST00000521918 KRTAP8-1Q8IUC2 63 aa2.37□□□□□ -2.03
SPIDR-216ENST00000521918 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
SPIDR-216ENST00000521918 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
SPIDR-216ENST00000521918 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
SPIDR-216ENST00000521918 COA5Q86WW8 74 aa2.35□□□□□ -2.03
SPIDR-216ENST00000521918 CYSTM1Q9H1C7 97 aa2.35□□□□□ -2.03
SPIDR-216ENST00000521918 COX7CP15954 63 aa2.34□□□□□ -2.03
SPIDR-216ENST00000521918 H7BZZ5 65 aa2.33□□□□□ -2.04
SPIDR-216ENST00000521918 SPRR2EP22531 72 aa2.33□□□□□ -2.04
SPIDR-216ENST00000521918 SPRR2BP35325 72 aa2.33□□□□□ -2.04
SPIDR-216ENST00000521918 SPRR2AP35326 72 aa2.33□□□□□ -2.04
SPIDR-216ENST00000521918 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
SPIDR-216ENST00000521918 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
SPIDR-216ENST00000521918 RPS28P62857 69 aaKnown RBP2.28□□□□□ -2.04
SPIDR-216ENST00000521918 SPRR2DP22532 72 aa2.26□□□□□ -2.05
SPIDR-216ENST00000521918 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
SPIDR-216ENST00000521918 SPATA8Q6RVD6 105 aa2.25□□□□□ -2.05
SPIDR-216ENST00000521918 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
SPIDR-216ENST00000521918 A0A0D9SG42 100 aa2.24□□□□□ -2.05
SPIDR-216ENST00000521918 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
SPIDR-216ENST00000521918 KRTAP19-7Q3SYF9 63 aa2.24□□□□□ -2.05
SPIDR-216ENST00000521918 SERP1Q9Y6X1 66 aa2.24□□□□□ -2.05
SPIDR-216ENST00000521918 CCDC179H3BU77 68 aa2.23□□□□□ -2.05
SPIDR-216ENST00000521918 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
SPIDR-216ENST00000521918 MT1EP04732 61 aa2.21□□□□□ -2.06
SPIDR-216ENST00000521918 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
SPIDR-216ENST00000521918 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
SPIDR-216ENST00000521918 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
SPIDR-216ENST00000521918 A0A1B0GU69 56 aa2.19□□□□□ -2.06
SPIDR-216ENST00000521918 TMEM258P61165 79 aa2.19□□□□□ -2.06
SPIDR-216ENST00000521918 ATP5EP56381 51 aaPredicted RBP2.18□□□□□ -2.06
SPIDR-216ENST00000521918 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
SPIDR-216ENST00000521918 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
SPIDR-216ENST00000521918 BRK1Q8WUW1 75 aa2.16□□□□□ -2.06
SPIDR-216ENST00000521918 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
SPIDR-216ENST00000521918 C10orf95Q9H7T3 257 aa2.14□□□□□ -2.07
SPIDR-216ENST00000521918 LINC01558Q9Y6Z2 57 aa2.14□□□□□ -2.07
SPIDR-216ENST00000521918 MT1LQ93083 61 aa2.11□□□□□ -2.07
SPIDR-216ENST00000521918 PRR15LQ9BU68 103 aa2.11□□□□□ -2.07
SPIDR-216ENST00000521918 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
SPIDR-216ENST00000521918 MT1GP13640 62 aa2.1□□□□□ -2.07
SPIDR-216ENST00000521918 ROMO1P60602 79 aa2.1□□□□□ -2.07
SPIDR-216ENST00000521918 MT1MQ8N339 61 aa2.1□□□□□ -2.07
SPIDR-216ENST00000521918 TNP1P09430 55 aa2.08□□□□□ -2.08
SPIDR-216ENST00000521918 UQCR11O14957 56 aa2.06□□□□□ -2.08
SPIDR-216ENST00000521918 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
SPIDR-216ENST00000521918 Q1T7F1 81 aa2.04□□□□□ -2.08
SPIDR-216ENST00000521918 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
SPIDR-216ENST00000521918 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
SPIDR-216ENST00000521918 MIR22HGQ0VDD5 57 aa2.01□□□□□ -2.09
SPIDR-216ENST00000521918 MT4P47944 62 aa1.96□□□□□ -2.1
SPIDR-216ENST00000521918 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
SPIDR-216ENST00000521918 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
SPIDR-216ENST00000521918 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
SPIDR-216ENST00000521918 CDC42SE1Q9NRR8 79 aa1.88□□□□□ -2.11
SPIDR-216ENST00000521918 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
SPIDR-216ENST00000521918 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
SPIDR-216ENST00000521918 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
SPIDR-216ENST00000521918 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
SPIDR-216ENST00000521918 INE1O15225 51 aa1.79□□□□□ -2.12
SPIDR-216ENST00000521918 MT1AP04731 61 aa1.79□□□□□ -2.12
SPIDR-216ENST00000521918 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
SPIDR-216ENST00000521918 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
SPIDR-216ENST00000521918 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
SPIDR-216ENST00000521918 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
SPIDR-216ENST00000521918 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
SPIDR-216ENST00000521918 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SPIDR-216ENST00000521918 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
SPIDR-216ENST00000521918 PRM1P04553 51 aa0.95□□□□□ -2.26
SPIDR-216ENST00000521918 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
SPIDR-216ENST00000521918 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms