RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 KRTAP4-3Q9BYR4 195 aa8.98□□□□□ -0.97
LAPTM4B-203ENST00000521545 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
LAPTM4B-203ENST00000521545 HMCN1Q96RW7 5635 aa8.89□□□□□ -0.99
LAPTM4B-203ENST00000521545 KRTAP5-4Q6L8H1 288 aa8.85□□□□□ -0.99
LAPTM4B-203ENST00000521545 UQCR11O14957 56 aa8.84□□□□□ -0.99
LAPTM4B-203ENST00000521545 KRTAP12-3P60328 96 aa8.84□□□□□ -0.99
LAPTM4B-203ENST00000521545 TMEM258P61165 79 aa8.74□□□□□ -1.01
LAPTM4B-203ENST00000521545 KRTAP4-7Q9BYR0 210 aa8.73□□□□□ -1.01
LAPTM4B-203ENST00000521545 KRTAP4-6Q9BYQ5 205 aa8.71□□□□□ -1.02
LAPTM4B-203ENST00000521545 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
LAPTM4B-203ENST00000521545 KRTAP25-1Q3LHN0 102 aa8.61□□□□□ -1.03
LAPTM4B-203ENST00000521545 AHNAK2Q8IVF2 5795 aa8.58□□□□□ -1.04
LAPTM4B-203ENST00000521545 K7ERS5 55 aa8.55□□□□□ -1.04
LAPTM4B-203ENST00000521545 KRTAP5-10Q6L8G5 202 aa8.52□□□□□ -1.05
LAPTM4B-203ENST00000521545 KRTAP5-5Q701N2 237 aaPredicted RBP8.42□□□□□ -1.06
LAPTM4B-203ENST00000521545 KRTAP20-2Q3LI61 65 aa8.38□□□□□ -1.07
LAPTM4B-203ENST00000521545 KRTAP19-4Q3LI73 84 aa8.37□□□□□ -1.07
LAPTM4B-203ENST00000521545 V9GYY9 64 aa8.37□□□□□ -1.07
LAPTM4B-203ENST00000521545 SPRR5A0A1B0GTR4 108 aa8.34□□□□□ -1.07
LAPTM4B-203ENST00000521545 PSPHP1O15172 72 aa8.34□□□□□ -1.07
LAPTM4B-203ENST00000521545 KRTAP12-4P60329 112 aa8.34□□□□□ -1.07
LAPTM4B-203ENST00000521545 KRTAP5-3Q6L8H2 238 aa8.31□□□□□ -1.08
LAPTM4B-203ENST00000521545 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
LAPTM4B-203ENST00000521545 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
LAPTM4B-203ENST00000521545 Q1T7F1 81 aa8.25□□□□□ -1.09
LAPTM4B-203ENST00000521545 KRTAP5-7Q6L8G8 165 aa8.23□□□□□ -1.09
LAPTM4B-203ENST00000521545 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
LAPTM4B-203ENST00000521545 LCE3CQ5T5A8 94 aa8.12□□□□□ -1.11
LAPTM4B-203ENST00000521545 SYNE1Q8NF91 8797 aaKnown RBP8.08□□□□□ -1.12
LAPTM4B-203ENST00000521545 A6NED7 52 aa8.07□□□□□ -1.12
LAPTM4B-203ENST00000521545 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
LAPTM4B-203ENST00000521545 ROMO1P60602 79 aa7.87□□□□□ -1.15
LAPTM4B-203ENST00000521545 RPS28P62857 69 aaKnown RBP7.86□□□□□ -1.15
LAPTM4B-203ENST00000521545 MT1AP04731 61 aa7.83□□□□□ -1.16
LAPTM4B-203ENST00000521545 KRTAP6-1Q3LI64 71 aa7.79□□□□□ -1.16
LAPTM4B-203ENST00000521545 KRTAP5-2Q701N4 177 aa7.72□□□□□ -1.17
LAPTM4B-203ENST00000521545 KRTAP4-11Q9BYQ6 195 aa7.7□□□□□ -1.18
LAPTM4B-203ENST00000521545 KRTAP9-6A8MVA2 160 aa7.61□□□□□ -1.19
LAPTM4B-203ENST00000521545 KRTAP9-4Q9BYQ2 154 aa7.61□□□□□ -1.19
LAPTM4B-203ENST00000521545 KRTAP6-2Q3LI66 62 aa7.49□□□□□ -1.21
LAPTM4B-203ENST00000521545 KRTAP5-8O75690 187 aa7.42□□□□□ -1.22
LAPTM4B-203ENST00000521545 PCP4P48539 62 aa7.27□□□□□ -1.25
LAPTM4B-203ENST00000521545 OBSCNQ5VST9 7968 aa7.25□□□□□ -1.25
LAPTM4B-203ENST00000521545 MT3P25713 68 aa7.21□□□□□ -1.26
LAPTM4B-203ENST00000521545 KRTAP9-9Q9BYP9 154 aa7.13□□□□□ -1.27
LAPTM4B-203ENST00000521545 MUC5BQ9HC84 5762 aaPredicted RBP7.09□□□□□ -1.27
LAPTM4B-203ENST00000521545 MUC5ACP98088 5654 aa7.08□□□□□ -1.28
LAPTM4B-203ENST00000521545 AHNAKQ09666 5890 aaKnown RBP7.06□□□□□ -1.28
LAPTM4B-203ENST00000521545 KRTAP5-1Q6L8H4 278 aa6.95□□□□□ -1.3
LAPTM4B-203ENST00000521545 BRK1Q8WUW1 75 aa6.68□□□□□ -1.34
LAPTM4B-203ENST00000521545 LCE1EQ5T753 118 aa6.64□□□□□ -1.35
LAPTM4B-203ENST00000521545 LCE1BQ5T7P3 118 aa6.29□□□□□ -1.4
LAPTM4B-203ENST00000521545 PMAIP1Q13794 54 aa6.27□□□□□ -1.41
LAPTM4B-203ENST00000521545 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
LAPTM4B-203ENST00000521545 LCE1CQ5T751 118 aa6.16□□□□□ -1.42
LAPTM4B-203ENST00000521545 KRTAP4-12Q9BQ66 201 aa6.12□□□□□ -1.43
LAPTM4B-203ENST00000521545 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
LAPTM4B-203ENST00000521545 H3BS24 57 aa5.96□□□□□ -1.46
LAPTM4B-203ENST00000521545 LCE3DQ9BYE3 92 aa5.84□□□□□ -1.47
LAPTM4B-203ENST00000521545 KRTAP5-11Q6L8G4 156 aa5.58□□□□□ -1.52
LAPTM4B-203ENST00000521545 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.56□□□□□ -1.52
LAPTM4B-203ENST00000521545 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
LAPTM4B-203ENST00000521545 LCE1FQ5T754 118 aa5.49□□□□□ -1.53
LAPTM4B-203ENST00000521545 LCE3EQ5T5B0 92 aa5.47□□□□□ -1.53
LAPTM4B-203ENST00000521545 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
LAPTM4B-203ENST00000521545 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
LAPTM4B-203ENST00000521545 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
LAPTM4B-203ENST00000521545 KRTAP21-2Q3LI59 83 aa5.12□□□□□ -1.59
LAPTM4B-203ENST00000521545 PHGR1C9JFL3 82 aa5.01□□□□□ -1.61
LAPTM4B-203ENST00000521545 KRTAP4-4Q9BYR3 166 aa4.74□□□□□ -1.65
LAPTM4B-203ENST00000521545 MUC19Q7Z5P9 8384 aa4.48□□□□□ -1.69
LAPTM4B-203ENST00000521545 PRM1P04553 51 aa4□□□□□ -1.77
LAPTM4B-203ENST00000521545 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
LAPTM4B-203ENST00000521545 KRTAP21-1Q3LI58 79 aa3.81□□□□□ -1.8
LAPTM4B-203ENST00000521545 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
LAPTM4B-203ENST00000521545 MUC16Q8WXI7 14507 aa3.19□□□□□ -1.9
LAPTM4B-203ENST00000521545 INE1O15225 51 aa3.06□□□□□ -1.92
Retrieved 77 of 20,778 RNA–protein pairs in 82.9 ms