RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	KRTAP19-3	Q7Z4W3	81 aa		3.06	□□□□□ -1.92
PTK2-223	ENST00000520828	SPATA8	Q6RVD6	105 aa		3.04	□□□□□ -1.92
PTK2-223	ENST00000520828		A0A1B0GU33	70 aa		3.03	□□□□□ -1.92
PTK2-223	ENST00000520828	MT3	P25713	68 aa		3.03	□□□□□ -1.92
PTK2-223	ENST00000520828	CAMK2N1	Q7Z7J9	78 aa		3.03	□□□□□ -1.92
PTK2-223	ENST00000520828		A0A1B0GU69	56 aa		3.01	□□□□□ -1.93
PTK2-223	ENST00000520828	MT1E	P04732	61 aa		3.01	□□□□□ -1.93
PTK2-223	ENST00000520828	KRTAP19-7	Q3SYF9	63 aa		3.01	□□□□□ -1.93
PTK2-223	ENST00000520828	SPINT4	Q6UDR6	99 aa		3.01	□□□□□ -1.93
PTK2-223	ENST00000520828	SPRR5	A0A1B0GTR4	108 aa		3	□□□□□ -1.93
PTK2-223	ENST00000520828	ATP5E	P56381	51 aa	Predicted RBP	2.98	□□□□□ -1.93
PTK2-223	ENST00000520828	KRTAP5-1	Q6L8H4	278 aa		2.97	□□□□□ -1.93
PTK2-223	ENST00000520828		A8MU10	97 aa		2.95	□□□□□ -1.94
PTK2-223	ENST00000520828	MT1G	P13640	62 aa		2.95	□□□□□ -1.94
PTK2-223	ENST00000520828	KRTAP5-4	Q6L8H1	288 aa		2.95	□□□□□ -1.94
PTK2-223	ENST00000520828	PP632	Q6XCG6	107 aa		2.95	□□□□□ -1.94
PTK2-223	ENST00000520828	TMEM258	P61165	79 aa		2.94	□□□□□ -1.94
PTK2-223	ENST00000520828	SMIM26	A0A096LP01	95 aa		2.93	□□□□□ -1.94
PTK2-223	ENST00000520828	KRTAP12-1	P59990	96 aa		2.93	□□□□□ -1.94
PTK2-223	ENST00000520828	PRR15L	Q9BU68	103 aa		2.93	□□□□□ -1.94
PTK2-223	ENST00000520828	MT1M	Q8N339	61 aa		2.9	□□□□□ -1.95
PTK2-223	ENST00000520828	LINC01558	Q9Y6Z2	57 aa		2.9	□□□□□ -1.95
PTK2-223	ENST00000520828	KRTAP19-5	Q3LI72	72 aa		2.85	□□□□□ -1.95
PTK2-223	ENST00000520828	KRTAP4-4	Q9BYR3	166 aa		2.85	□□□□□ -1.95
PTK2-223	ENST00000520828	KRTAP4-3	Q9BYR4	195 aa		2.83	□□□□□ -1.96
PTK2-223	ENST00000520828	AHNAK	Q09666	5890 aa	Known RBP	2.83	□□□□□ -1.96
PTK2-223	ENST00000520828	UQCR11	O14957	56 aa		2.82	□□□□□ -1.96
PTK2-223	ENST00000520828	KRTAP20-2	Q3LI61	65 aa		2.82	□□□□□ -1.96
PTK2-223	ENST00000520828	KRTAP9-6	A8MVA2	160 aa		2.81	□□□□□ -1.96
PTK2-223	ENST00000520828	MT1L	Q93083	61 aa		2.81	□□□□□ -1.96
PTK2-223	ENST00000520828	PSPHP1	O15172	72 aa		2.8	□□□□□ -1.96
PTK2-223	ENST00000520828	C10orf95	Q9H7T3	257 aa		2.8	□□□□□ -1.96
PTK2-223	ENST00000520828	MIR22HG	Q0VDD5	57 aa		2.79	□□□□□ -1.96
PTK2-223	ENST00000520828	TNP1	P09430	55 aa		2.78	□□□□□ -1.96
PTK2-223	ENST00000520828	LCE3A	Q5TA76	89 aa		2.77	□□□□□ -1.97
PTK2-223	ENST00000520828		V9GYY9	64 aa		2.76	□□□□□ -1.97
PTK2-223	ENST00000520828	PCP4	P48539	62 aa		2.74	□□□□□ -1.97
PTK2-223	ENST00000520828		Q1T7F1	81 aa		2.74	□□□□□ -1.97
PTK2-223	ENST00000520828		K7ERS5	55 aa		2.73	□□□□□ -1.97
PTK2-223	ENST00000520828	KRTAP12-4	P60329	112 aa		2.73	□□□□□ -1.97
PTK2-223	ENST00000520828	MUC5AC	P98088	5654 aa		2.72	□□□□□ -1.97
PTK2-223	ENST00000520828		A6NED7	52 aa		2.71	□□□□□ -1.98
PTK2-223	ENST00000520828	LCE1F	Q5T754	118 aa		2.7	□□□□□ -1.98
PTK2-223	ENST00000520828	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.68	□□□□□ -1.98
PTK2-223	ENST00000520828	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.67	□□□□□ -1.98
PTK2-223	ENST00000520828	KRTAP12-3	P60328	96 aa		2.64	□□□□□ -1.99
PTK2-223	ENST00000520828	RPS28	P62857	69 aa	Known RBP	2.64	□□□□□ -1.99
PTK2-223	ENST00000520828	KRTAP25-1	Q3LHN0	102 aa		2.63	□□□□□ -1.99
PTK2-223	ENST00000520828	SYNE1	Q8NF91	8797 aa	Known RBP	2.62	□□□□□ -1.99
PTK2-223	ENST00000520828	KRTAP5-8	O75690	187 aa		2.6	□□□□□ -1.99
PTK2-223	ENST00000520828	CDC42SE1	Q9NRR8	79 aa		2.58	□□□□□ -2
PTK2-223	ENST00000520828	LCE3C	Q5T5A8	94 aa		2.55	□□□□□ -2
PTK2-223	ENST00000520828	ROMO1	P60602	79 aa		2.54	□□□□□ -2
PTK2-223	ENST00000520828	OBSCN	Q5VST9	7968 aa		2.53	□□□□□ -2
PTK2-223	ENST00000520828	KRTAP5-2	Q701N4	177 aa		2.52	□□□□□ -2.01
PTK2-223	ENST00000520828	SVIP	Q8NHG7	77 aa		2.45	□□□□□ -2.02
PTK2-223	ENST00000520828	BRK1	Q8WUW1	75 aa		2.41	□□□□□ -2.02
PTK2-223	ENST00000520828		A0A0A0MQY5	61 aa		2.4	□□□□□ -2.03
PTK2-223	ENST00000520828	KRTAP6-1	Q3LI64	71 aa		2.4	□□□□□ -2.03
PTK2-223	ENST00000520828	MT1A	P04731	61 aa		2.39	□□□□□ -2.03
PTK2-223	ENST00000520828	KRTAP6-2	Q3LI66	62 aa		2.37	□□□□□ -2.03
PTK2-223	ENST00000520828	LCE3E	Q5T5B0	92 aa		2.33	□□□□□ -2.04
PTK2-223	ENST00000520828	PMAIP1	Q13794	54 aa		2.26	□□□□□ -2.05
PTK2-223	ENST00000520828	PRAC1	Q96KF2	57 aa		2.19	□□□□□ -2.06
PTK2-223	ENST00000520828	NDUFAF8	A1L188	74 aa		2.17	□□□□□ -2.06
PTK2-223	ENST00000520828	LCE1C	Q5T751	118 aa		2.1	□□□□□ -2.07
PTK2-223	ENST00000520828	LCE1B	Q5T7P3	118 aa		2.1	□□□□□ -2.07
PTK2-223	ENST00000520828	PRO0628	Q9UI54	55 aa		2.1	□□□□□ -2.07
PTK2-223	ENST00000520828	KTN1-AS1	Q86SY8	53 aa		2.01	□□□□□ -2.09
PTK2-223	ENST00000520828	PHGR1	C9JFL3	82 aa		1.86	□□□□□ -2.11
PTK2-223	ENST00000520828	LUZP6	Q538Z0	58 aa		1.82	□□□□□ -2.12
PTK2-223	ENST00000520828	LCE3D	Q9BYE3	92 aa		1.79	□□□□□ -2.12
PTK2-223	ENST00000520828	MUC19	Q7Z5P9	8384 aa		1.73	□□□□□ -2.13
PTK2-223	ENST00000520828	KRTAP21-2	Q3LI59	83 aa		1.58	□□□□□ -2.16
PTK2-223	ENST00000520828	KRTAP21-1	Q3LI58	79 aa		1.42	□□□□□ -2.18
PTK2-223	ENST00000520828	PRM1	P04553	51 aa		1.33	□□□□□ -2.2
PTK2-223	ENST00000520828	INE1	O15225	51 aa		1.19	□□□□□ -2.22
PTK2-223	ENST00000520828	MUC16	Q8WXI7	14507 aa		1.04	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms