RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 KRTAP12-3P60328 96 aa1.36□□□□□ -2.19
HMGCR-213ENST00000515776 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
HMGCR-213ENST00000515776 LPAP08519 4548 aa1.34□□□□□ -2.19
HMGCR-213ENST00000515776 HERC1Q15751 4861 aa1.33□□□□□ -2.2
HMGCR-213ENST00000515776 M0R2T5 61 aa1.33□□□□□ -2.2
HMGCR-213ENST00000515776 KRTAP12-4P60329 112 aa1.33□□□□□ -2.2
HMGCR-213ENST00000515776 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
HMGCR-213ENST00000515776 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
HMGCR-213ENST00000515776 KRTAP19-2Q3LHN2 52 aa1.27□□□□□ -2.21
HMGCR-213ENST00000515776 KRTAP19-5Q3LI72 72 aa1.26□□□□□ -2.21
HMGCR-213ENST00000515776 SPRR2GQ9BYE4 73 aa1.25□□□□□ -2.21
HMGCR-213ENST00000515776 PRM1P04553 51 aa1.21□□□□□ -2.22
HMGCR-213ENST00000515776 MT1XP80297 61 aa1.19□□□□□ -2.22
HMGCR-213ENST00000515776 MT1HL1P0DM35 61 aa1.18□□□□□ -2.22
HMGCR-213ENST00000515776 DNHD1Q96M86 4753 aa1.17□□□□□ -2.22
HMGCR-213ENST00000515776 LRP2P98164 4655 aa1.16□□□□□ -2.22
HMGCR-213ENST00000515776 KRTAP19-8Q3LI54 63 aa1.16□□□□□ -2.22
HMGCR-213ENST00000515776 J3QKU1 62 aa1.15□□□□□ -2.23
HMGCR-213ENST00000515776 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
HMGCR-213ENST00000515776 HYDINQ4G0P3 5121 aa1.13□□□□□ -2.23
HMGCR-213ENST00000515776 MT1BP07438 61 aa1.12□□□□□ -2.23
HMGCR-213ENST00000515776 KMT2CQ8NEZ4 4911 aaKnown RBP1.1□□□□□ -2.23
HMGCR-213ENST00000515776 MUC2Q02817 5179 aa1.1□□□□□ -2.23
HMGCR-213ENST00000515776 MT1AP04731 61 aa1.09□□□□□ -2.23
HMGCR-213ENST00000515776 SYNE1Q8NF91 8797 aaKnown RBP1.09□□□□□ -2.24
HMGCR-213ENST00000515776 MT1EP04732 61 aa1.06□□□□□ -2.24
HMGCR-213ENST00000515776 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
HMGCR-213ENST00000515776 KRTAP19-7Q3SYF9 63 aa1.06□□□□□ -2.24
HMGCR-213ENST00000515776 MT1LQ93083 61 aa1.06□□□□□ -2.24
HMGCR-213ENST00000515776 HMCN2Q8NDA2 5059 aa1.06□□□□□ -2.24
HMGCR-213ENST00000515776 MT1FP04733 61 aa1.05□□□□□ -2.24
HMGCR-213ENST00000515776 MT2AP02795 61 aa1.04□□□□□ -2.24
HMGCR-213ENST00000515776 RYR3Q15413 4870 aa1.02□□□□□ -2.25
HMGCR-213ENST00000515776 HERC2O95714 4834 aa1.01□□□□□ -2.25
HMGCR-213ENST00000515776 RYR1P21817 5038 aa1□□□□□ -2.25
HMGCR-213ENST00000515776 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
HMGCR-213ENST00000515776 MT1GP13640 62 aa1□□□□□ -2.25
HMGCR-213ENST00000515776 RYR2Q92736 4967 aa1□□□□□ -2.25
HMGCR-213ENST00000515776 SPRR2FQ96RM1 72 aa0.98□□□□□ -2.25
HMGCR-213ENST00000515776 UBR4Q5T4S7 5183 aa0.96□□□□□ -2.26
HMGCR-213ENST00000515776 MT1HP80294 61 aa0.95□□□□□ -2.26
HMGCR-213ENST00000515776 BIRC6Q9NR09 4857 aa0.94□□□□□ -2.26
HMGCR-213ENST00000515776 PCLOQ9Y6V0 5065 aa0.94□□□□□ -2.26
HMGCR-213ENST00000515776 KRTAP21-3Q3LHN1 58 aa0.93□□□□□ -2.26
HMGCR-213ENST00000515776 SPRR2AP35326 72 aa0.92□□□□□ -2.26
HMGCR-213ENST00000515776 SPRR2DP22532 72 aa0.91□□□□□ -2.26
HMGCR-213ENST00000515776 SPRR2BP35325 72 aa0.91□□□□□ -2.26
HMGCR-213ENST00000515776 MT1MQ8N339 61 aa0.91□□□□□ -2.26
HMGCR-213ENST00000515776 SPRR2EP22531 72 aa0.9□□□□□ -2.27
HMGCR-213ENST00000515776 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
HMGCR-213ENST00000515776 ABCA13Q86UQ4 5058 aa0.89□□□□□ -2.27
HMGCR-213ENST00000515776 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
HMGCR-213ENST00000515776 USH2AO75445 5202 aa0.87□□□□□ -2.27
HMGCR-213ENST00000515776 RNF213Q63HN8 5207 aa0.85□□□□□ -2.27
HMGCR-213ENST00000515776 EPPK1P58107 5090 aaKnown RBP0.85□□□□□ -2.27
HMGCR-213ENST00000515776 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
HMGCR-213ENST00000515776 KMT2DO14686 5537 aa0.81□□□□□ -2.28
HMGCR-213ENST00000515776 FAT4Q6V0I7 4981 aa0.79□□□□□ -2.28
HMGCR-213ENST00000515776 KIAA1109Q2LD37 5005 aa0.78□□□□□ -2.28
HMGCR-213ENST00000515776 SSPOA2VEC9 5147 aa0.77□□□□□ -2.29
HMGCR-213ENST00000515776 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
HMGCR-213ENST00000515776 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
HMGCR-213ENST00000515776 MDN1Q9NU22 5596 aa0.73□□□□□ -2.29
HMGCR-213ENST00000515776 MUC5ACP98088 5654 aa0.65□□□□□ -2.31
HMGCR-213ENST00000515776 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.31
HMGCR-213ENST00000515776 KRTAP19-6Q3LI70 58 aa0.63□□□□□ -2.31
HMGCR-213ENST00000515776 MUC12Q9UKN1 5478 aa0.58□□□□□ -2.32
HMGCR-213ENST00000515776 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
HMGCR-213ENST00000515776 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
HMGCR-213ENST00000515776 DSTQ03001 7570 aaKnown RBP0.48□□□□□ -2.33
HMGCR-213ENST00000515776 MACF1Q9UPN3 7388 aaKnown RBP0.45□□□□□ -2.34
HMGCR-213ENST00000515776 SYNE2Q8WXH0 6885 aaKnown RBP0.45□□□□□ -2.34
HMGCR-213ENST00000515776 KRTAP20-2Q3LI61 65 aa0.44□□□□□ -2.34
HMGCR-213ENST00000515776 FSIP2Q5CZC0 6907 aa0.39□□□□□ -2.35
HMGCR-213ENST00000515776 MT4P47944 62 aa0.37□□□□□ -2.35
HMGCR-213ENST00000515776 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
HMGCR-213ENST00000515776 KRTAP20-1Q3LI63 56 aa0.3□□□□□ -2.36
HMGCR-213ENST00000515776 NEBP20929 6669 aa0.28□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 89.8 ms