RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
CALCOCO2-217ENST00000510356 SMIM20Q8N5G0 67 aa3.15□□□□□ -1.91
CALCOCO2-217ENST00000510356 LINC01554Q52M75 96 aa3.14□□□□□ -1.91
CALCOCO2-217ENST00000510356 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
CALCOCO2-217ENST00000510356 CYSTM1Q9H1C7 97 aa3.12□□□□□ -1.91
CALCOCO2-217ENST00000510356 MT-ATP8P03928 68 aa3.1□□□□□ -1.91
CALCOCO2-217ENST00000510356 CHKB-CPT1BH3BT56 60 aa3.09□□□□□ -1.91
CALCOCO2-217ENST00000510356 K7ERU9 68 aa3.09□□□□□ -1.91
CALCOCO2-217ENST00000510356 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
CALCOCO2-217ENST00000510356 MT1GP13640 62 aa3.06□□□□□ -1.92
CALCOCO2-217ENST00000510356 MT1EP04732 61 aa3.05□□□□□ -1.92
CALCOCO2-217ENST00000510356 SPANXA2-OT1Q8N9U9 137 aa3.05□□□□□ -1.92
CALCOCO2-217ENST00000510356 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
CALCOCO2-217ENST00000510356 SNURFQ9Y675 71 aa3.04□□□□□ -1.92
CALCOCO2-217ENST00000510356 SERP2Q8N6R1 65 aa3□□□□□ -1.93
CALCOCO2-217ENST00000510356 KRTAP13-4Q3LI77 160 aa2.98□□□□□ -1.93
CALCOCO2-217ENST00000510356 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
CALCOCO2-217ENST00000510356 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
CALCOCO2-217ENST00000510356 COA5Q86WW8 74 aa2.95□□□□□ -1.94
CALCOCO2-217ENST00000510356 SEC61GP60059 68 aa2.94□□□□□ -1.94
CALCOCO2-217ENST00000510356 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
CALCOCO2-217ENST00000510356 MT1MQ8N339 61 aa2.94□□□□□ -1.94
CALCOCO2-217ENST00000510356 SERP1Q9Y6X1 66 aa2.93□□□□□ -1.94
CALCOCO2-217ENST00000510356 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
CALCOCO2-217ENST00000510356 A0A0D9SG42 100 aa2.88□□□□□ -1.95
CALCOCO2-217ENST00000510356 COX7CP15954 63 aa2.88□□□□□ -1.95
CALCOCO2-217ENST00000510356 A0A1B0GU33 70 aa2.87□□□□□ -1.95
CALCOCO2-217ENST00000510356 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CALCOCO2-217ENST00000510356 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
CALCOCO2-217ENST00000510356 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
CALCOCO2-217ENST00000510356 H7BZZ5 65 aa2.86□□□□□ -1.95
CALCOCO2-217ENST00000510356 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
CALCOCO2-217ENST00000510356 SPINT4Q6UDR6 99 aa2.85□□□□□ -1.95
CALCOCO2-217ENST00000510356 MT1LQ93083 61 aa2.85□□□□□ -1.95
CALCOCO2-217ENST00000510356 KRTAP12-1P59990 96 aa2.84□□□□□ -1.95
CALCOCO2-217ENST00000510356 SMIM26A0A096LP01 95 aa2.81□□□□□ -1.96
CALCOCO2-217ENST00000510356 A0A1B0GU69 56 aa2.81□□□□□ -1.96
CALCOCO2-217ENST00000510356 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
CALCOCO2-217ENST00000510356 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
CALCOCO2-217ENST00000510356 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CALCOCO2-217ENST00000510356 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CALCOCO2-217ENST00000510356 ANAPC13Q9BS18 74 aa2.75□□□□□ -1.97
CALCOCO2-217ENST00000510356 TNP1P09430 55 aa2.74□□□□□ -1.97
CALCOCO2-217ENST00000510356 ATP5EP56381 51 aaPredicted RBP2.73□□□□□ -1.97
CALCOCO2-217ENST00000510356 PRR15LQ9BU68 103 aa2.73□□□□□ -1.97
CALCOCO2-217ENST00000510356 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
CALCOCO2-217ENST00000510356 C10orf95Q9H7T3 257 aa2.71□□□□□ -1.98
CALCOCO2-217ENST00000510356 CCDC179H3BU77 68 aa2.67□□□□□ -1.98
CALCOCO2-217ENST00000510356 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
CALCOCO2-217ENST00000510356 UQCR11O14957 56 aa2.63□□□□□ -1.99
CALCOCO2-217ENST00000510356 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
CALCOCO2-217ENST00000510356 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
CALCOCO2-217ENST00000510356 TMEM258P61165 79 aa2.61□□□□□ -1.99
CALCOCO2-217ENST00000510356 KRTAP25-1Q3LHN0 102 aa2.57□□□□□ -2
CALCOCO2-217ENST00000510356 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
CALCOCO2-217ENST00000510356 K7ERS5 55 aa2.54□□□□□ -2
CALCOCO2-217ENST00000510356 V9GYY9 64 aa2.5□□□□□ -2.01
CALCOCO2-217ENST00000510356 Q1T7F1 81 aa2.46□□□□□ -2.02
CALCOCO2-217ENST00000510356 PSPHP1O15172 72 aa2.45□□□□□ -2.02
CALCOCO2-217ENST00000510356 MT1AP04731 61 aa2.44□□□□□ -2.02
CALCOCO2-217ENST00000510356 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
CALCOCO2-217ENST00000510356 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
CALCOCO2-217ENST00000510356 A6NED7 52 aa2.38□□□□□ -2.03
CALCOCO2-217ENST00000510356 CDC42SE1Q9NRR8 79 aa2.38□□□□□ -2.03
CALCOCO2-217ENST00000510356 ROMO1P60602 79 aa2.33□□□□□ -2.04
CALCOCO2-217ENST00000510356 RPS28P62857 69 aaKnown RBP2.32□□□□□ -2.04
CALCOCO2-217ENST00000510356 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
CALCOCO2-217ENST00000510356 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
CALCOCO2-217ENST00000510356 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CALCOCO2-217ENST00000510356 BRK1Q8WUW1 75 aa1.96□□□□□ -2.1
CALCOCO2-217ENST00000510356 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
CALCOCO2-217ENST00000510356 PRO0628Q9UI54 55 aa1.92□□□□□ -2.1
CALCOCO2-217ENST00000510356 PMAIP1Q13794 54 aa1.84□□□□□ -2.11
CALCOCO2-217ENST00000510356 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
CALCOCO2-217ENST00000510356 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CALCOCO2-217ENST00000510356 PRM1P04553 51 aa1.18□□□□□ -2.22
CALCOCO2-217ENST00000510356 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
CALCOCO2-217ENST00000510356 INE1O15225 51 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 81 ms