RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 PCLOQ9Y6V0 5065 aa0.25□□□□□ -2.37
SMARCA5-202ENST00000508573 FREM2Q5SZK8 3169 aa0.24□□□□□ -2.37
SMARCA5-202ENST00000508573 VPS13CQ709C8 3753 aa0.24□□□□□ -2.37
SMARCA5-202ENST00000508573 XIRP2A4UGR9 3374 aa0.24□□□□□ -2.37
SMARCA5-202ENST00000508573 WDFY4Q6ZS81 3184 aa0.24□□□□□ -2.37
SMARCA5-202ENST00000508573 KMT2CQ8NEZ4 4911 aaKnown RBP0.24□□□□□ -2.37
SMARCA5-202ENST00000508573 RPS29P62273 56 aaKnown RBP0.23□□□□□ -2.37
SMARCA5-202ENST00000508573 DCHS1Q96JQ0 3298 aa0.23□□□□□ -2.37
SMARCA5-202ENST00000508573 USH2AO75445 5202 aa0.22□□□□□ -2.37
SMARCA5-202ENST00000508573 SRCAPQ6ZRS2 3230 aa0.22□□□□□ -2.37
SMARCA5-202ENST00000508573 TLN1Q9Y490 2541 aaKnown RBP0.22□□□□□ -2.37
SMARCA5-202ENST00000508573 A0A096LPF7 62 aa0.21□□□□□ -2.38
SMARCA5-202ENST00000508573 MT1LQ93083 61 aa0.21□□□□□ -2.38
SMARCA5-202ENST00000508573 DEFB4AO15263 64 aa0.19□□□□□ -2.38
SMARCA5-202ENST00000508573 STATHP02808 62 aa0.19□□□□□ -2.38
SMARCA5-202ENST00000508573 CEP295Q9C0D2 2601 aa0.18□□□□□ -2.38
SMARCA5-202ENST00000508573 DNHD1Q96M86 4753 aa0.18□□□□□ -2.38
SMARCA5-202ENST00000508573 LAMA2P24043 3122 aaKnown RBP0.18□□□□□ -2.38
SMARCA5-202ENST00000508573 BOD1L1Q8NFC6 3051 aa0.17□□□□□ -2.38
SMARCA5-202ENST00000508573 MYO15AQ9UKN7 3530 aa0.17□□□□□ -2.38
SMARCA5-202ENST00000508573 MYO9AB2RTY4 2548 aa0.17□□□□□ -2.38
SMARCA5-202ENST00000508573 LINC01556Q5JQF7 62 aa0.16□□□□□ -2.38
SMARCA5-202ENST00000508573 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
SMARCA5-202ENST00000508573 MT1XP80297 61 aa0.15□□□□□ -2.39
SMARCA5-202ENST00000508573 MUC2Q02817 5179 aa0.15□□□□□ -2.39
SMARCA5-202ENST00000508573 KRTAP19-7Q3SYF9 63 aa0.13□□□□□ -2.39
SMARCA5-202ENST00000508573 UBR4Q5T4S7 5183 aa0.13□□□□□ -2.39
SMARCA5-202ENST00000508573 EYSQ5T1H1 3165 aa0.12□□□□□ -2.39
SMARCA5-202ENST00000508573 DEFB108BQ8NET1 73 aa0.11□□□□□ -2.39
SMARCA5-202ENST00000508573 RYR1P21817 5038 aa0.11□□□□□ -2.39
SMARCA5-202ENST00000508573 PCNTO95613 3336 aa0.1□□□□□ -2.39
SMARCA5-202ENST00000508573 CD52P31358 61 aa0.1□□□□□ -2.39
SMARCA5-202ENST00000508573 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
SMARCA5-202ENST00000508573 LOC400499M0QZD8 3231 aa0.09□□□□□ -2.39
SMARCA5-202ENST00000508573 KRTAP19-8Q3LI54 63 aa0.09□□□□□ -2.4
SMARCA5-202ENST00000508573 DSTQ03001 7570 aaKnown RBP0.06□□□□□ -2.4
SMARCA5-202ENST00000508573 CEP350Q5VT06 3117 aa0.06□□□□□ -2.4
SMARCA5-202ENST00000508573 HERC2O95714 4834 aa0.04□□□□□ -2.4
SMARCA5-202ENST00000508573 CENPEQ02224 2701 aa0.04□□□□□ -2.4
SMARCA5-202ENST00000508573 MT1GP13640 62 aa0.04□□□□□ -2.4
SMARCA5-202ENST00000508573 KRTAP6-1Q3LI64 71 aa0.03□□□□□ -2.4
SMARCA5-202ENST00000508573 USP34Q70CQ2 3546 aa0.03□□□□□ -2.4
SMARCA5-202ENST00000508573 ASPMQ8IZT6 3477 aa0□□□□□ -2.41
SMARCA5-202ENST00000508573 BIRC6Q9NR09 4857 aa0□□□□□ -2.41
SMARCA5-202ENST00000508573 COX14Q96I36 57 aa-0.01□□□□□ -2.41
SMARCA5-202ENST00000508573 Q9Y3F1 56 aa-0.01□□□□□ -2.41
SMARCA5-202ENST00000508573 CFAP47Q6ZTR5 3102 aa-0.02□□□□□ -2.41
SMARCA5-202ENST00000508573 SPEGQ15772 3267 aa-0.02□□□□□ -2.41
SMARCA5-202ENST00000508573 NEBP20929 6669 aa-0.04□□□□□ -2.42
SMARCA5-202ENST00000508573 UNC80Q8N2C7 3258 aa-0.05□□□□□ -2.42
SMARCA5-202ENST00000508573 RYR3Q15413 4870 aa-0.05□□□□□ -2.42
SMARCA5-202ENST00000508573 WDFY3Q8IZQ1 3526 aa-0.06□□□□□ -2.42
SMARCA5-202ENST00000508573 HTN3P15516 51 aa-0.07□□□□□ -2.42
SMARCA5-202ENST00000508573 MT1MQ8N339 61 aa-0.08□□□□□ -2.42
SMARCA5-202ENST00000508573 UTRNP46939 3433 aa-0.09□□□□□ -2.42
SMARCA5-202ENST00000508573 EPPK1P58107 5090 aaKnown RBP-0.09□□□□□ -2.42
SMARCA5-202ENST00000508573 MT2AP02795 61 aa-0.09□□□□□ -2.42
SMARCA5-202ENST00000508573 RNF213Q63HN8 5207 aa-0.12□□□□□ -2.43
SMARCA5-202ENST00000508573 HYDINQ4G0P3 5121 aa-0.13□□□□□ -2.43
SMARCA5-202ENST00000508573 BRCA2P51587 3418 aa-0.13□□□□□ -2.43
SMARCA5-202ENST00000508573 VCANP13611 3396 aa-0.14□□□□□ -2.43
SMARCA5-202ENST00000508573 KRTAP20-2Q3LI61 65 aa-0.14□□□□□ -2.43
SMARCA5-202ENST00000508573 MT4P47944 62 aa-0.15□□□□□ -2.43
SMARCA5-202ENST00000508573 EP400Q96L91 3159 aa-0.16□□□□□ -2.43
SMARCA5-202ENST00000508573 MT1HL1P0DM35 61 aa-0.16□□□□□ -2.44
SMARCA5-202ENST00000508573 VPS13AQ96RL7 3174 aa-0.17□□□□□ -2.44
SMARCA5-202ENST00000508573 GOLGB1Q14789 3259 aaKnown RBP-0.19□□□□□ -2.44
SMARCA5-202ENST00000508573 MT1BP07438 61 aa-0.21□□□□□ -2.44
SMARCA5-202ENST00000508573 KIAA1109Q2LD37 5005 aa-0.23□□□□□ -2.45
SMARCA5-202ENST00000508573 CENPFP49454 3210 aa-0.23□□□□□ -2.45
SMARCA5-202ENST00000508573 RYR2Q92736 4967 aa-0.28□□□□□ -2.45
SMARCA5-202ENST00000508573 KRTAP19-2Q3LHN2 52 aa-0.29□□□□□ -2.46
SMARCA5-202ENST00000508573 ABCA13Q86UQ4 5058 aa-0.34□□□□□ -2.46
SMARCA5-202ENST00000508573 MT1FP04733 61 aa-0.34□□□□□ -2.46
SMARCA5-202ENST00000508573 DNAH14Q0VDD8 3507 aa-0.35□□□□□ -2.47
SMARCA5-202ENST00000508573 CDH23Q9H251 3354 aa-0.42□□□□□ -2.48
SMARCA5-202ENST00000508573 KRTAP20-1Q3LI63 56 aa-0.7□□□□□ -2.52
SMARCA5-202ENST00000508573 KRTAP19-6Q3LI70 58 aa-0.85□□□□□ -2.55
Retrieved 78 of 20,778 RNA–protein pairs in 23.9 ms