RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 MT1MQ8N339 61 aa1.22□□□□□ -2.21
TCOF1-208ENST00000506063 H7BZZ5 65 aa1.21□□□□□ -2.22
TCOF1-208ENST00000506063 MT1GP13640 62 aa1.21□□□□□ -2.22
TCOF1-208ENST00000506063 PRR15LQ9BU68 103 aa1.21□□□□□ -2.22
TCOF1-208ENST00000506063 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
TCOF1-208ENST00000506063 A0A1B0GU69 56 aa1.2□□□□□ -2.22
TCOF1-208ENST00000506063 KRTAP5-5Q701N2 237 aaPredicted RBP1.2□□□□□ -2.22
TCOF1-208ENST00000506063 CAMK2N1Q7Z7J9 78 aa1.2□□□□□ -2.22
TCOF1-208ENST00000506063 TMEM258P61165 79 aa1.19□□□□□ -2.22
TCOF1-208ENST00000506063 KRTAP3-2Q9BYR7 98 aa1.19□□□□□ -2.22
TCOF1-208ENST00000506063 SMIM26A0A096LP01 95 aa1.18□□□□□ -2.22
TCOF1-208ENST00000506063 A0A0D9SG42 100 aa1.18□□□□□ -2.22
TCOF1-208ENST00000506063 CCDC179H3BU77 68 aa1.18□□□□□ -2.22
TCOF1-208ENST00000506063 OBSCNQ5VST9 7968 aa1.17□□□□□ -2.22
TCOF1-208ENST00000506063 A0A1B0GU33 70 aa1.17□□□□□ -2.22
TCOF1-208ENST00000506063 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
TCOF1-208ENST00000506063 SPINT4Q6UDR6 99 aa1.16□□□□□ -2.22
TCOF1-208ENST00000506063 KRTAP13-4Q3LI77 160 aa1.15□□□□□ -2.23
TCOF1-208ENST00000506063 SPATA8Q6RVD6 105 aa1.15□□□□□ -2.23
TCOF1-208ENST00000506063 PP632Q6XCG6 107 aa1.15□□□□□ -2.23
TCOF1-208ENST00000506063 K7ERS5 55 aa1.14□□□□□ -2.23
TCOF1-208ENST00000506063 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
TCOF1-208ENST00000506063 V9GYY9 64 aa1.14□□□□□ -2.23
TCOF1-208ENST00000506063 UQCR11O14957 56 aa1.13□□□□□ -2.23
TCOF1-208ENST00000506063 MT1LQ93083 61 aa1.13□□□□□ -2.23
TCOF1-208ENST00000506063 LINC01558Q9Y6Z2 57 aa1.12□□□□□ -2.23
TCOF1-208ENST00000506063 A8MU10 97 aa1.11□□□□□ -2.23
TCOF1-208ENST00000506063 KRTAP12-1P59990 96 aa1.11□□□□□ -2.23
TCOF1-208ENST00000506063 TNP1P09430 55 aa1.1□□□□□ -2.23
TCOF1-208ENST00000506063 MIR22HGQ0VDD5 57 aa1.1□□□□□ -2.23
TCOF1-208ENST00000506063 A6NED7 52 aa1.09□□□□□ -2.23
TCOF1-208ENST00000506063 PSPHP1O15172 72 aa1.09□□□□□ -2.23
TCOF1-208ENST00000506063 KRTAP19-5Q3LI72 72 aa1.09□□□□□ -2.23
TCOF1-208ENST00000506063 Q1T7F1 81 aa1.07□□□□□ -2.24
TCOF1-208ENST00000506063 PCP4P48539 62 aa1.06□□□□□ -2.24
TCOF1-208ENST00000506063 CDC42SE1Q9NRR8 79 aa1.06□□□□□ -2.24
TCOF1-208ENST00000506063 KRTAP25-1Q3LHN0 102 aa1.05□□□□□ -2.24
TCOF1-208ENST00000506063 C10orf95Q9H7T3 257 aa1.05□□□□□ -2.24
TCOF1-208ENST00000506063 LCE3AQ5TA76 89 aa1.04□□□□□ -2.24
TCOF1-208ENST00000506063 KRTAP4-12Q9BQ66 201 aa1.04□□□□□ -2.24
TCOF1-208ENST00000506063 KRTAP12-3P60328 96 aa1.02□□□□□ -2.25
TCOF1-208ENST00000506063 RPS28P62857 69 aaKnown RBP1.02□□□□□ -2.25
TCOF1-208ENST00000506063 ROMO1P60602 79 aa1□□□□□ -2.25
TCOF1-208ENST00000506063 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
TCOF1-208ENST00000506063 KRTAP5-6Q6L8G9 129 aaPredicted RBP1□□□□□ -2.25
TCOF1-208ENST00000506063 KRTAP23-1A1A580 65 aa0.99□□□□□ -2.25
TCOF1-208ENST00000506063 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
TCOF1-208ENST00000506063 SVIPQ8NHG7 77 aa0.99□□□□□ -2.25
TCOF1-208ENST00000506063 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
TCOF1-208ENST00000506063 BRK1Q8WUW1 75 aa0.97□□□□□ -2.25
TCOF1-208ENST00000506063 KRTAP19-4Q3LI73 84 aa0.96□□□□□ -2.26
TCOF1-208ENST00000506063 KRTAP15-1Q3LI76 137 aa0.96□□□□□ -2.26
TCOF1-208ENST00000506063 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
TCOF1-208ENST00000506063 MT1AP04731 61 aa0.94□□□□□ -2.26
TCOF1-208ENST00000506063 LCE3CQ5T5A8 94 aa0.92□□□□□ -2.26
TCOF1-208ENST00000506063 H3BS24 57 aa0.91□□□□□ -2.26
TCOF1-208ENST00000506063 LCE1EQ5T753 118 aa0.9□□□□□ -2.27
TCOF1-208ENST00000506063 PMAIP1Q13794 54 aa0.89□□□□□ -2.27
TCOF1-208ENST00000506063 LCE1FQ5T754 118 aa0.86□□□□□ -2.27
TCOF1-208ENST00000506063 KRTAP4-4Q9BYR3 166 aa0.86□□□□□ -2.27
TCOF1-208ENST00000506063 PRO0628Q9UI54 55 aa0.86□□□□□ -2.27
TCOF1-208ENST00000506063 LCE1BQ5T7P3 118 aa0.85□□□□□ -2.27
TCOF1-208ENST00000506063 MT3P25713 68 aa0.84□□□□□ -2.27
TCOF1-208ENST00000506063 LCE1CQ5T751 118 aa0.84□□□□□ -2.27
TCOF1-208ENST00000506063 KTN1-AS1Q86SY8 53 aa0.84□□□□□ -2.27
TCOF1-208ENST00000506063 PRAC1Q96KF2 57 aa0.84□□□□□ -2.27
TCOF1-208ENST00000506063 KRTAP9-6A8MVA2 160 aa0.82□□□□□ -2.28
TCOF1-208ENST00000506063 A0A0A0MQY5 61 aa0.79□□□□□ -2.28
TCOF1-208ENST00000506063 LUZP6Q538Z0 58 aa0.78□□□□□ -2.28
TCOF1-208ENST00000506063 MUC19Q7Z5P9 8384 aa0.75□□□□□ -2.29
TCOF1-208ENST00000506063 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
TCOF1-208ENST00000506063 LCE3DQ9BYE3 92 aa0.68□□□□□ -2.3
TCOF1-208ENST00000506063 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
TCOF1-208ENST00000506063 LCE3EQ5T5B0 92 aa0.65□□□□□ -2.31
TCOF1-208ENST00000506063 NDUFAF8A1L188 74 aa0.61□□□□□ -2.31
TCOF1-208ENST00000506063 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
TCOF1-208ENST00000506063 INE1O15225 51 aa0.51□□□□□ -2.33
TCOF1-208ENST00000506063 PRM1P04553 51 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms