RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 MT1EP04732 61 aa2.19□□□□□ -2.06
GYPB-205ENST00000505583 ATP5EP56381 51 aaPredicted RBP2.19□□□□□ -2.06
GYPB-205ENST00000505583 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
GYPB-205ENST00000505583 COX7CP15954 63 aa2.18□□□□□ -2.06
GYPB-205ENST00000505583 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
GYPB-205ENST00000505583 CCDC179H3BU77 68 aa2.17□□□□□ -2.06
GYPB-205ENST00000505583 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
GYPB-205ENST00000505583 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
GYPB-205ENST00000505583 TRAV7A0A075B6U4 112 aa2.16□□□□□ -2.06
GYPB-205ENST00000505583 H3BPC8 53 aa2.16□□□□□ -2.06
GYPB-205ENST00000505583 SPINT4Q6UDR6 99 aa2.16□□□□□ -2.06
GYPB-205ENST00000505583 SERP2Q8N6R1 65 aa2.16□□□□□ -2.06
GYPB-205ENST00000505583 MT4P47944 62 aa2.15□□□□□ -2.07
GYPB-205ENST00000505583 A6NED7 52 aa2.14□□□□□ -2.07
GYPB-205ENST00000505583 CYSTM1Q9H1C7 97 aa2.14□□□□□ -2.07
GYPB-205ENST00000505583 SERP1Q9Y6X1 66 aa2.14□□□□□ -2.07
GYPB-205ENST00000505583 ACYP2P14621 99 aa2.13□□□□□ -2.07
GYPB-205ENST00000505583 MT1GP13640 62 aa2.11□□□□□ -2.07
GYPB-205ENST00000505583 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
GYPB-205ENST00000505583 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
GYPB-205ENST00000505583 MT1MQ8N339 61 aa2.1□□□□□ -2.07
GYPB-205ENST00000505583 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
GYPB-205ENST00000505583 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
GYPB-205ENST00000505583 A0A0D9SG42 100 aa2.09□□□□□ -2.07
GYPB-205ENST00000505583 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.07
GYPB-205ENST00000505583 CHKB-CPT1BH3BT56 60 aa2.08□□□□□ -2.08
GYPB-205ENST00000505583 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
GYPB-205ENST00000505583 BRK1Q8WUW1 75 aa2.07□□□□□ -2.08
GYPB-205ENST00000505583 MT1LQ93083 61 aa2.07□□□□□ -2.08
GYPB-205ENST00000505583 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
GYPB-205ENST00000505583 PMAIP1Q13794 54 aa2.05□□□□□ -2.08
GYPB-205ENST00000505583 SNURFQ9Y675 71 aa2.04□□□□□ -2.08
GYPB-205ENST00000505583 SPATA8Q6RVD6 105 aa2.03□□□□□ -2.08
GYPB-205ENST00000505583 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
GYPB-205ENST00000505583 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
GYPB-205ENST00000505583 A0A1B0GU33 70 aa2.01□□□□□ -2.09
GYPB-205ENST00000505583 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
GYPB-205ENST00000505583 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
GYPB-205ENST00000505583 H7BZZ5 65 aa2□□□□□ -2.09
GYPB-205ENST00000505583 KRTAP25-1Q3LHN0 102 aa2□□□□□ -2.09
GYPB-205ENST00000505583 LCE3AQ5TA76 89 aa2□□□□□ -2.09
GYPB-205ENST00000505583 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
GYPB-205ENST00000505583 Q1T7F1 81 aa1.99□□□□□ -2.09
GYPB-205ENST00000505583 KTN1-AS1Q86SY8 53 aa1.98□□□□□ -2.09
GYPB-205ENST00000505583 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
GYPB-205ENST00000505583 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
GYPB-205ENST00000505583 COA5Q86WW8 74 aa1.97□□□□□ -2.09
GYPB-205ENST00000505583 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
GYPB-205ENST00000505583 PRR15LQ9BU68 103 aa1.94□□□□□ -2.1
GYPB-205ENST00000505583 SYNE1Q8NF91 8797 aaKnown RBP1.92□□□□□ -2.1
GYPB-205ENST00000505583 TNP1P09430 55 aa1.91□□□□□ -2.1
GYPB-205ENST00000505583 CDC42SE1Q9NRR8 79 aa1.91□□□□□ -2.1
GYPB-205ENST00000505583 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
GYPB-205ENST00000505583 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
GYPB-205ENST00000505583 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
GYPB-205ENST00000505583 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
GYPB-205ENST00000505583 A0A1B0GU69 56 aa1.85□□□□□ -2.11
GYPB-205ENST00000505583 UQCR11O14957 56 aa1.82□□□□□ -2.12
GYPB-205ENST00000505583 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
GYPB-205ENST00000505583 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
GYPB-205ENST00000505583 MIR22HGQ0VDD5 57 aa1.78□□□□□ -2.12
GYPB-205ENST00000505583 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
GYPB-205ENST00000505583 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
GYPB-205ENST00000505583 MT1AP04731 61 aa1.75□□□□□ -2.13
GYPB-205ENST00000505583 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
GYPB-205ENST00000505583 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
GYPB-205ENST00000505583 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
GYPB-205ENST00000505583 ROMO1P60602 79 aa1.69□□□□□ -2.14
GYPB-205ENST00000505583 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
GYPB-205ENST00000505583 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
GYPB-205ENST00000505583 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
GYPB-205ENST00000505583 INE1O15225 51 aa1.45□□□□□ -2.18
GYPB-205ENST00000505583 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
GYPB-205ENST00000505583 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
GYPB-205ENST00000505583 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
GYPB-205ENST00000505583 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
GYPB-205ENST00000505583 PRM1P04553 51 aa0.82□□□□□ -2.28
GYPB-205ENST00000505583 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 123.9 ms