RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 KRTAP19-5Q3LI72 72 aa0.29□□□□□ -2.36
LMNB1-207ENST00000494185 DEFB124Q8NES8 71 aa0.29□□□□□ -2.36
LMNB1-207ENST00000494185 VPS13AQ96RL7 3174 aa0.29□□□□□ -2.36
LMNB1-207ENST00000494185 XIRP2A4UGR9 3374 aa0.29□□□□□ -2.36
LMNB1-207ENST00000494185 CENPEQ02224 2701 aa0.29□□□□□ -2.36
LMNB1-207ENST00000494185 EP400Q96L91 3159 aa0.29□□□□□ -2.36
LMNB1-207ENST00000494185 STAB2Q8WWQ8 2551 aa0.28□□□□□ -2.36
LMNB1-207ENST00000494185 MT1AP04731 61 aa0.28□□□□□ -2.36
LMNB1-207ENST00000494185 DEFB110Q30KQ9 67 aa0.28□□□□□ -2.36
LMNB1-207ENST00000494185 KRTAP6-2Q3LI66 62 aa0.28□□□□□ -2.36
LMNB1-207ENST00000494185 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
LMNB1-207ENST00000494185 BRCA2P51587 3418 aa0.28□□□□□ -2.36
LMNB1-207ENST00000494185 STARD9Q9P2P6 4700 aa0.28□□□□□ -2.36
LMNB1-207ENST00000494185 MGAM2Q2M2H8 2515 aa0.28□□□□□ -2.36
LMNB1-207ENST00000494185 HMCN2Q8NDA2 5059 aa0.28□□□□□ -2.37
LMNB1-207ENST00000494185 SPTAN1Q13813 2472 aaKnown RBP0.27□□□□□ -2.37
LMNB1-207ENST00000494185 SPEGQ15772 3267 aa0.27□□□□□ -2.37
LMNB1-207ENST00000494185 CEP295Q9C0D2 2601 aa0.27□□□□□ -2.37
LMNB1-207ENST00000494185 DSTQ03001 7570 aaKnown RBP0.27□□□□□ -2.37
LMNB1-207ENST00000494185 WDFY3Q8IZQ1 3526 aa0.27□□□□□ -2.37
LMNB1-207ENST00000494185 DNAH14Q0VDD8 3507 aa0.26□□□□□ -2.37
LMNB1-207ENST00000494185 TLN1Q9Y490 2541 aaKnown RBP0.26□□□□□ -2.37
LMNB1-207ENST00000494185 SSPOA2VEC9 5147 aa0.26□□□□□ -2.37
LMNB1-207ENST00000494185 LAMA2P24043 3122 aaKnown RBP0.26□□□□□ -2.37
LMNB1-207ENST00000494185 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
LMNB1-207ENST00000494185 HYDINQ4G0P3 5121 aa0.25□□□□□ -2.37
LMNB1-207ENST00000494185 SPRR2DP22532 72 aa0.25□□□□□ -2.37
LMNB1-207ENST00000494185 PCNTO95613 3336 aa0.25□□□□□ -2.37
LMNB1-207ENST00000494185 RNF213Q63HN8 5207 aa0.25□□□□□ -2.37
LMNB1-207ENST00000494185 VCANP13611 3396 aa0.25□□□□□ -2.37
LMNB1-207ENST00000494185 GOLGB1Q14789 3259 aaKnown RBP0.25□□□□□ -2.37
LMNB1-207ENST00000494185 EPPK1P58107 5090 aaKnown RBP0.24□□□□□ -2.37
LMNB1-207ENST00000494185 HERC2O95714 4834 aa0.24□□□□□ -2.37
LMNB1-207ENST00000494185 DNHD1Q96M86 4753 aa0.24□□□□□ -2.37
LMNB1-207ENST00000494185 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
LMNB1-207ENST00000494185 LINC01556Q5JQF7 62 aa0.24□□□□□ -2.37
LMNB1-207ENST00000494185 UNC80Q8N2C7 3258 aa0.23□□□□□ -2.37
LMNB1-207ENST00000494185 LOC400499M0QZD8 3231 aa0.23□□□□□ -2.37
LMNB1-207ENST00000494185 KMT2CQ8NEZ4 4911 aaKnown RBP0.23□□□□□ -2.37
LMNB1-207ENST00000494185 RYR3Q15413 4870 aa0.23□□□□□ -2.37
LMNB1-207ENST00000494185 BIRC6Q9NR09 4857 aa0.23□□□□□ -2.37
LMNB1-207ENST00000494185 SPRR2BP35325 72 aa0.23□□□□□ -2.37
LMNB1-207ENST00000494185 EYSQ5T1H1 3165 aa0.23□□□□□ -2.37
LMNB1-207ENST00000494185 RYR1P21817 5038 aa0.23□□□□□ -2.37
LMNB1-207ENST00000494185 MUC12Q9UKN1 5478 aa0.23□□□□□ -2.37
LMNB1-207ENST00000494185 RYR2Q92736 4967 aa0.22□□□□□ -2.37
LMNB1-207ENST00000494185 SPRR2AP35326 72 aa0.22□□□□□ -2.37
LMNB1-207ENST00000494185 DEFB133Q30KQ1 61 aa0.22□□□□□ -2.37
LMNB1-207ENST00000494185 KRTAP20-1Q3LI63 56 aa0.22□□□□□ -2.37
LMNB1-207ENST00000494185 ABCA13Q86UQ4 5058 aa0.21□□□□□ -2.38
LMNB1-207ENST00000494185 SPRR2FQ96RM1 72 aa0.21□□□□□ -2.38
LMNB1-207ENST00000494185 CENPFP49454 3210 aa0.21□□□□□ -2.38
LMNB1-207ENST00000494185 MYO9AB2RTY4 2548 aa0.21□□□□□ -2.38
LMNB1-207ENST00000494185 MT1EP04732 61 aa0.2□□□□□ -2.38
LMNB1-207ENST00000494185 SPRR2EP22531 72 aa0.2□□□□□ -2.38
LMNB1-207ENST00000494185 RPS29P62273 56 aaKnown RBP0.2□□□□□ -2.38
LMNB1-207ENST00000494185 Q9Y3F1 56 aa0.19□□□□□ -2.38
LMNB1-207ENST00000494185 CDH23Q9H251 3354 aa0.19□□□□□ -2.38
LMNB1-207ENST00000494185 DEFB4AO15263 64 aa0.18□□□□□ -2.38
LMNB1-207ENST00000494185 HTN3P15516 51 aa0.18□□□□□ -2.38
LMNB1-207ENST00000494185 MT1LQ93083 61 aa0.18□□□□□ -2.38
LMNB1-207ENST00000494185 MT1HP80294 61 aa0.17□□□□□ -2.38
LMNB1-207ENST00000494185 CD52P31358 61 aa0.16□□□□□ -2.38
LMNB1-207ENST00000494185 MT1XP80297 61 aa0.15□□□□□ -2.39
LMNB1-207ENST00000494185 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
LMNB1-207ENST00000494185 MT1GP13640 62 aa0.14□□□□□ -2.39
LMNB1-207ENST00000494185 KRTAP19-7Q3SYF9 63 aa0.14□□□□□ -2.39
LMNB1-207ENST00000494185 KRTAP19-2Q3LHN2 52 aa0.13□□□□□ -2.39
LMNB1-207ENST00000494185 KRTAP6-1Q3LI64 71 aa0.12□□□□□ -2.39
LMNB1-207ENST00000494185 KRTAP19-8Q3LI54 63 aa0.11□□□□□ -2.39
LMNB1-207ENST00000494185 MT1BP07438 61 aa0.09□□□□□ -2.4
LMNB1-207ENST00000494185 MT2AP02795 61 aa0.08□□□□□ -2.4
LMNB1-207ENST00000494185 MT1MQ8N339 61 aa0.08□□□□□ -2.4
LMNB1-207ENST00000494185 MT1HL1P0DM35 61 aa0.06□□□□□ -2.4
LMNB1-207ENST00000494185 MT4P47944 62 aa0.04□□□□□ -2.4
LMNB1-207ENST00000494185 KRTAP20-2Q3LI61 65 aa0.03□□□□□ -2.4
LMNB1-207ENST00000494185 KRTAP19-6Q3LI70 58 aa0.03□□□□□ -2.4
LMNB1-207ENST00000494185 MT1FP04733 61 aa0.02□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms