RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 H3BS24 57 aa4.12□□□□□ -1.75
HDAC6-233ENST00000489352 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
HDAC6-233ENST00000489352 P0C880 135 aa4.08□□□□□ -1.76
HDAC6-233ENST00000489352 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
HDAC6-233ENST00000489352 ACYP2P14621 99 aa4.06□□□□□ -1.76
HDAC6-233ENST00000489352 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
HDAC6-233ENST00000489352 KRTAP12-4P60329 112 aa4.04□□□□□ -1.76
HDAC6-233ENST00000489352 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
HDAC6-233ENST00000489352 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
HDAC6-233ENST00000489352 CHKB-CPT1BH3BT56 60 aa4.01□□□□□ -1.77
HDAC6-233ENST00000489352 COA5Q86WW8 74 aa4.01□□□□□ -1.77
HDAC6-233ENST00000489352 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
HDAC6-233ENST00000489352 SPTSSBQ8NFR3 76 aa3.96□□□□□ -1.78
HDAC6-233ENST00000489352 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
HDAC6-233ENST00000489352 MT1LQ93083 61 aa3.95□□□□□ -1.78
HDAC6-233ENST00000489352 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
HDAC6-233ENST00000489352 Q1T7F1 81 aa3.91□□□□□ -1.78
HDAC6-233ENST00000489352 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
HDAC6-233ENST00000489352 A0A0D9SG42 100 aa3.88□□□□□ -1.79
HDAC6-233ENST00000489352 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
HDAC6-233ENST00000489352 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
HDAC6-233ENST00000489352 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
HDAC6-233ENST00000489352 A0A1B0GU69 56 aa3.82□□□□□ -1.8
HDAC6-233ENST00000489352 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
HDAC6-233ENST00000489352 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
HDAC6-233ENST00000489352 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
HDAC6-233ENST00000489352 PSPHP1O15172 72 aa3.78□□□□□ -1.8
HDAC6-233ENST00000489352 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
HDAC6-233ENST00000489352 A8MU10 97 aa3.75□□□□□ -1.81
HDAC6-233ENST00000489352 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
HDAC6-233ENST00000489352 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
HDAC6-233ENST00000489352 A0A1B0GU33 70 aa3.7□□□□□ -1.82
HDAC6-233ENST00000489352 UQCR11O14957 56 aa3.7□□□□□ -1.82
HDAC6-233ENST00000489352 A6NED7 52 aa3.69□□□□□ -1.82
HDAC6-233ENST00000489352 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
HDAC6-233ENST00000489352 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
HDAC6-233ENST00000489352 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
HDAC6-233ENST00000489352 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
HDAC6-233ENST00000489352 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
HDAC6-233ENST00000489352 K7ERS5 55 aa3.54□□□□□ -1.84
HDAC6-233ENST00000489352 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
HDAC6-233ENST00000489352 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
HDAC6-233ENST00000489352 ROMO1P60602 79 aa3.51□□□□□ -1.85
HDAC6-233ENST00000489352 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
HDAC6-233ENST00000489352 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
HDAC6-233ENST00000489352 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
HDAC6-233ENST00000489352 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
HDAC6-233ENST00000489352 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
HDAC6-233ENST00000489352 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
HDAC6-233ENST00000489352 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
HDAC6-233ENST00000489352 TNP1P09430 55 aa3.36□□□□□ -1.87
HDAC6-233ENST00000489352 MT1AP04731 61 aa3.35□□□□□ -1.87
HDAC6-233ENST00000489352 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
HDAC6-233ENST00000489352 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
HDAC6-233ENST00000489352 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
HDAC6-233ENST00000489352 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
HDAC6-233ENST00000489352 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
HDAC6-233ENST00000489352 MT3P25713 68 aa3.16□□□□□ -1.9
HDAC6-233ENST00000489352 KRTAP23-1A1A580 65 aa3.14□□□□□ -1.91
HDAC6-233ENST00000489352 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
HDAC6-233ENST00000489352 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
HDAC6-233ENST00000489352 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
HDAC6-233ENST00000489352 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
HDAC6-233ENST00000489352 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
HDAC6-233ENST00000489352 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
HDAC6-233ENST00000489352 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
HDAC6-233ENST00000489352 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
HDAC6-233ENST00000489352 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
HDAC6-233ENST00000489352 INE1O15225 51 aa2.72□□□□□ -1.97
HDAC6-233ENST00000489352 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
HDAC6-233ENST00000489352 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
HDAC6-233ENST00000489352 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
HDAC6-233ENST00000489352 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
HDAC6-233ENST00000489352 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
HDAC6-233ENST00000489352 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
HDAC6-233ENST00000489352 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
HDAC6-233ENST00000489352 PRM1P04553 51 aa1.72□□□□□ -2.13
HDAC6-233ENST00000489352 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms