RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
HLA-B-253ENST00000481849 C20orf197Q8N268 126 aa3.67□□□□□ -1.82
HLA-B-253ENST00000481849 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
HLA-B-253ENST00000481849 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
HLA-B-253ENST00000481849 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
HLA-B-253ENST00000481849 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
HLA-B-253ENST00000481849 H3BPC8 53 aa3.62□□□□□ -1.83
HLA-B-253ENST00000481849 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
HLA-B-253ENST00000481849 DMAC1Q96GE9 116 aa3.61□□□□□ -1.83
HLA-B-253ENST00000481849 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
HLA-B-253ENST00000481849 CYSTM1Q9H1C7 97 aa3.59□□□□□ -1.83
HLA-B-253ENST00000481849 SERP1Q9Y6X1 66 aa3.59□□□□□ -1.83
HLA-B-253ENST00000481849 H7BZZ5 65 aa3.57□□□□□ -1.84
HLA-B-253ENST00000481849 SMIM26A0A096LP01 95 aa3.54□□□□□ -1.84
HLA-B-253ENST00000481849 SNURFQ9Y675 71 aa3.53□□□□□ -1.84
HLA-B-253ENST00000481849 ACYP2P14621 99 aa3.51□□□□□ -1.85
HLA-B-253ENST00000481849 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
HLA-B-253ENST00000481849 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
HLA-B-253ENST00000481849 MT4P47944 62 aa3.5□□□□□ -1.85
HLA-B-253ENST00000481849 CHKB-CPT1BH3BT56 60 aa3.49□□□□□ -1.85
HLA-B-253ENST00000481849 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
HLA-B-253ENST00000481849 A8MU10 97 aa3.43□□□□□ -1.86
HLA-B-253ENST00000481849 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
HLA-B-253ENST00000481849 KRTAP13-4Q3LI77 160 aa3.42□□□□□ -1.86
HLA-B-253ENST00000481849 Q1T7F1 81 aa3.4□□□□□ -1.87
HLA-B-253ENST00000481849 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
HLA-B-253ENST00000481849 V9GYY9 64 aa3.38□□□□□ -1.87
HLA-B-253ENST00000481849 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
HLA-B-253ENST00000481849 MT1EP04732 61 aa3.35□□□□□ -1.87
HLA-B-253ENST00000481849 A0A0D9SG42 100 aa3.34□□□□□ -1.87
HLA-B-253ENST00000481849 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
HLA-B-253ENST00000481849 COA5Q86WW8 74 aa3.34□□□□□ -1.87
HLA-B-253ENST00000481849 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
HLA-B-253ENST00000481849 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
HLA-B-253ENST00000481849 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
HLA-B-253ENST00000481849 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
HLA-B-253ENST00000481849 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.88
HLA-B-253ENST00000481849 SEC61GP60059 68 aa3.26□□□□□ -1.89
HLA-B-253ENST00000481849 PMAIP1Q13794 54 aa3.26□□□□□ -1.89
HLA-B-253ENST00000481849 MT1GP13640 62 aa3.24□□□□□ -1.89
HLA-B-253ENST00000481849 LINC01558Q9Y6Z2 57 aa3.23□□□□□ -1.89
HLA-B-253ENST00000481849 A0A1B0GU33 70 aa3.22□□□□□ -1.89
HLA-B-253ENST00000481849 PSPHP1O15172 72 aa3.22□□□□□ -1.89
HLA-B-253ENST00000481849 KRTAP12-1P59990 96 aa3.21□□□□□ -1.9
HLA-B-253ENST00000481849 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
HLA-B-253ENST00000481849 MT1MQ8N339 61 aa3.2□□□□□ -1.9
HLA-B-253ENST00000481849 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
HLA-B-253ENST00000481849 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
HLA-B-253ENST00000481849 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
HLA-B-253ENST00000481849 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
HLA-B-253ENST00000481849 PRR15LQ9BU68 103 aa3.19□□□□□ -1.9
HLA-B-253ENST00000481849 MT1LQ93083 61 aa3.18□□□□□ -1.9
HLA-B-253ENST00000481849 A6NED7 52 aa3.15□□□□□ -1.91
HLA-B-253ENST00000481849 A0A1B0GU69 56 aa3.14□□□□□ -1.91
HLA-B-253ENST00000481849 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
HLA-B-253ENST00000481849 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
HLA-B-253ENST00000481849 TNP1P09430 55 aa3.09□□□□□ -1.91
HLA-B-253ENST00000481849 UQCR11O14957 56 aa3.07□□□□□ -1.92
HLA-B-253ENST00000481849 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
HLA-B-253ENST00000481849 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
HLA-B-253ENST00000481849 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
HLA-B-253ENST00000481849 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
HLA-B-253ENST00000481849 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
HLA-B-253ENST00000481849 K7ERS5 55 aa2.88□□□□□ -1.95
HLA-B-253ENST00000481849 KRTAP25-1Q3LHN0 102 aa2.84□□□□□ -1.95
HLA-B-253ENST00000481849 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
HLA-B-253ENST00000481849 ROMO1P60602 79 aa2.77□□□□□ -1.97
HLA-B-253ENST00000481849 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
HLA-B-253ENST00000481849 MT1AP04731 61 aa2.7□□□□□ -1.98
HLA-B-253ENST00000481849 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
HLA-B-253ENST00000481849 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
HLA-B-253ENST00000481849 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
HLA-B-253ENST00000481849 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
HLA-B-253ENST00000481849 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
HLA-B-253ENST00000481849 INE1O15225 51 aa2.15□□□□□ -2.07
HLA-B-253ENST00000481849 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
HLA-B-253ENST00000481849 PRM1P04553 51 aa1.42□□□□□ -2.18
HLA-B-253ENST00000481849 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 117 ms