RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 UBR4Q5T4S7 5183 aa0.11□□□□□ -2.39
TARDBP-208ENST00000477447 USH2AO75445 5202 aa0.11□□□□□ -2.39
TARDBP-208ENST00000477447 DNHD1Q96M86 4753 aa0.11□□□□□ -2.39
TARDBP-208ENST00000477447 ASPMQ8IZT6 3477 aa0.11□□□□□ -2.39
TARDBP-208ENST00000477447 DCHS1Q96JQ0 3298 aa0.11□□□□□ -2.39
TARDBP-208ENST00000477447 XIRP2A4UGR9 3374 aa0.1□□□□□ -2.39
TARDBP-208ENST00000477447 MT1EP04732 61 aa0.1□□□□□ -2.39
TARDBP-208ENST00000477447 STARD9Q9P2P6 4700 aa0.1□□□□□ -2.39
TARDBP-208ENST00000477447 HTN1P15515 57 aa0.09□□□□□ -2.4
TARDBP-208ENST00000477447 RPS29P62273 56 aaKnown RBP0.09□□□□□ -2.4
TARDBP-208ENST00000477447 MT1HP80294 61 aa0.09□□□□□ -2.4
TARDBP-208ENST00000477447 FREM2Q5SZK8 3169 aa0.09□□□□□ -2.4
TARDBP-208ENST00000477447 SPTAN1Q13813 2472 aaKnown RBP0.09□□□□□ -2.4
TARDBP-208ENST00000477447 KMT2CQ8NEZ4 4911 aaKnown RBP0.09□□□□□ -2.4
TARDBP-208ENST00000477447 SRCAPQ6ZRS2 3230 aa0.08□□□□□ -2.4
TARDBP-208ENST00000477447 CFAP47Q6ZTR5 3102 aa0.08□□□□□ -2.4
TARDBP-208ENST00000477447 MUC2Q02817 5179 aa0.08□□□□□ -2.4
TARDBP-208ENST00000477447 MT1LQ93083 61 aa0.08□□□□□ -2.4
TARDBP-208ENST00000477447 MACF1Q9UPN3 7388 aaKnown RBP0.08□□□□□ -2.4
TARDBP-208ENST00000477447 PCNTO95613 3336 aa0.08□□□□□ -2.4
TARDBP-208ENST00000477447 CENPEQ02224 2701 aa0.07□□□□□ -2.4
TARDBP-208ENST00000477447 RYR1P21817 5038 aa0.07□□□□□ -2.4
TARDBP-208ENST00000477447 LAMA2P24043 3122 aaKnown RBP0.07□□□□□ -2.4
TARDBP-208ENST00000477447 HERC2O95714 4834 aa0.07□□□□□ -2.4
TARDBP-208ENST00000477447 DEFB133Q30KQ1 61 aa0.07□□□□□ -2.4
TARDBP-208ENST00000477447 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
TARDBP-208ENST00000477447 UTRNP46939 3433 aa0.07□□□□□ -2.4
TARDBP-208ENST00000477447 RNF213Q63HN8 5207 aa0.07□□□□□ -2.4
TARDBP-208ENST00000477447 EPPK1P58107 5090 aaKnown RBP0.07□□□□□ -2.4
TARDBP-208ENST00000477447 LOC400499M0QZD8 3231 aa0.06□□□□□ -2.4
TARDBP-208ENST00000477447 BIRC6Q9NR09 4857 aa0.06□□□□□ -2.4
TARDBP-208ENST00000477447 LINC01556Q5JQF7 62 aa0.06□□□□□ -2.4
TARDBP-208ENST00000477447 PCLOQ9Y6V0 5065 aa0.06□□□□□ -2.4
TARDBP-208ENST00000477447 STATHP02808 62 aa0.05□□□□□ -2.4
TARDBP-208ENST00000477447 MT1XP80297 61 aa0.05□□□□□ -2.4
TARDBP-208ENST00000477447 UNC80Q8N2C7 3258 aa0.05□□□□□ -2.4
TARDBP-208ENST00000477447 TLN1Q9Y490 2541 aaKnown RBP0.05□□□□□ -2.4
TARDBP-208ENST00000477447 EYSQ5T1H1 3165 aa0.04□□□□□ -2.4
TARDBP-208ENST00000477447 BRCA2P51587 3418 aa0.04□□□□□ -2.4
TARDBP-208ENST00000477447 MYO9AB2RTY4 2548 aa0.04□□□□□ -2.4
TARDBP-208ENST00000477447 A0A096LPF7 62 aa0.04□□□□□ -2.4
TARDBP-208ENST00000477447 DEFB4AO15263 64 aa0.04□□□□□ -2.4
TARDBP-208ENST00000477447 VCANP13611 3396 aa0.04□□□□□ -2.4
TARDBP-208ENST00000477447 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
TARDBP-208ENST00000477447 CEP350Q5VT06 3117 aa0.03□□□□□ -2.4
TARDBP-208ENST00000477447 SPEGQ15772 3267 aa0.03□□□□□ -2.41
TARDBP-208ENST00000477447 VPS13AQ96RL7 3174 aa0.02□□□□□ -2.41
TARDBP-208ENST00000477447 EP400Q96L91 3159 aa0.02□□□□□ -2.41
TARDBP-208ENST00000477447 KRTAP19-7Q3SYF9 63 aa0.02□□□□□ -2.41
TARDBP-208ENST00000477447 DEFB108BQ8NET1 73 aa0.02□□□□□ -2.41
TARDBP-208ENST00000477447 COX14Q96I36 57 aa0.02□□□□□ -2.41
TARDBP-208ENST00000477447 CDH23Q9H251 3354 aa0.02□□□□□ -2.41
TARDBP-208ENST00000477447 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
TARDBP-208ENST00000477447 MT1GP13640 62 aa0.01□□□□□ -2.41
TARDBP-208ENST00000477447 KRTAP19-8Q3LI54 63 aa0.01□□□□□ -2.41
TARDBP-208ENST00000477447 KRTAP6-1Q3LI64 71 aa0.01□□□□□ -2.41
TARDBP-208ENST00000477447 RYR3Q15413 4870 aa0.01□□□□□ -2.41
TARDBP-208ENST00000477447 CD52P31358 61 aa0□□□□□ -2.41
TARDBP-208ENST00000477447 DNAH14Q0VDD8 3507 aa0□□□□□ -2.41
TARDBP-208ENST00000477447 KIAA1109Q2LD37 5005 aa0□□□□□ -2.41
TARDBP-208ENST00000477447 HYDINQ4G0P3 5121 aa-0.01□□□□□ -2.41
TARDBP-208ENST00000477447 Q9Y3F1 56 aa-0.01□□□□□ -2.41
TARDBP-208ENST00000477447 MT2AP02795 61 aa-0.02□□□□□ -2.41
TARDBP-208ENST00000477447 MT1MQ8N339 61 aa-0.02□□□□□ -2.41
TARDBP-208ENST00000477447 CENPFP49454 3210 aa-0.04□□□□□ -2.42
TARDBP-208ENST00000477447 KRTAP19-2Q3LHN2 52 aa-0.04□□□□□ -2.42
TARDBP-208ENST00000477447 ABCA13Q86UQ4 5058 aa-0.04□□□□□ -2.42
TARDBP-208ENST00000477447 GOLGB1Q14789 3259 aaKnown RBP-0.04□□□□□ -2.42
TARDBP-208ENST00000477447 MT1BP07438 61 aa-0.05□□□□□ -2.42
TARDBP-208ENST00000477447 RYR2Q92736 4967 aa-0.06□□□□□ -2.42
TARDBP-208ENST00000477447 MT1HL1P0DM35 61 aa-0.06□□□□□ -2.42
TARDBP-208ENST00000477447 HTN3P15516 51 aa-0.06□□□□□ -2.42
TARDBP-208ENST00000477447 MT4P47944 62 aa-0.06□□□□□ -2.42
TARDBP-208ENST00000477447 KRTAP20-2Q3LI61 65 aa-0.07□□□□□ -2.42
TARDBP-208ENST00000477447 NEBP20929 6669 aa-0.1□□□□□ -2.43
TARDBP-208ENST00000477447 MT1FP04733 61 aa-0.1□□□□□ -2.43
TARDBP-208ENST00000477447 KRTAP20-1Q3LI63 56 aa-0.25□□□□□ -2.45
TARDBP-208ENST00000477447 KRTAP19-6Q3LI70 58 aa-0.27□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms