RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 NSD1Q96L73 2696 aaPredicted RBP0.12□□□□□ -2.39
TOP2B-206ENST00000475717 SPTA1P02549 2419 aa0.12□□□□□ -2.39
TOP2B-206ENST00000475717 GCN1Q92616 2671 aaKnown RBP0.11□□□□□ -2.39
TOP2B-206ENST00000475717 COL6A5A8TX70 2615 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 CACNA1AO00555 2505 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 SPRR2AP35326 72 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 MT1HP80294 61 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 KRTAP19-8Q3LI54 63 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 KRTAP19-5Q3LI72 72 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 MT1LQ93083 61 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 USP9YO00507 2555 aaPredicted RBP0.11□□□□□ -2.39
TOP2B-206ENST00000475717 SPTBN4Q9H254 2564 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 WNK1Q9H4A3 2382 aa0.11□□□□□ -2.39
TOP2B-206ENST00000475717 ANKHD1Q8IWZ3 2542 aaKnown RBP0.1□□□□□ -2.39
TOP2B-206ENST00000475717 SPRR2EP22531 72 aa0.1□□□□□ -2.39
TOP2B-206ENST00000475717 SPRR2BP35325 72 aa0.1□□□□□ -2.39
TOP2B-206ENST00000475717 KRTAP19-2Q3LHN2 52 aa0.1□□□□□ -2.39
TOP2B-206ENST00000475717 SPRR2FQ96RM1 72 aa0.1□□□□□ -2.39
TOP2B-206ENST00000475717 EP300Q09472 2414 aaPredicted RBP0.1□□□□□ -2.39
TOP2B-206ENST00000475717 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
TOP2B-206ENST00000475717 USP9XQ93008 2570 aaPredicted RBP0.1□□□□□ -2.39
TOP2B-206ENST00000475717 CEP295Q9C0D2 2601 aa0.1□□□□□ -2.39
TOP2B-206ENST00000475717 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.39
TOP2B-206ENST00000475717 FLNBO75369 2602 aaKnown RBP0.09□□□□□ -2.39
TOP2B-206ENST00000475717 MT2AP02795 61 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 PRM1P04553 51 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 MT1FP04733 61 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 MT1BP07438 61 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 MT1HL1P0DM35 61 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 MT1GP13640 62 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 SPRR2DP22532 72 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 MT1XP80297 61 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 KRTAP19-7Q3SYF9 63 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 MT1MQ8N339 61 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 NEBP20929 6669 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 SETD2Q9BYW2 2564 aaPredicted RBP0.09□□□□□ -2.4
TOP2B-206ENST00000475717 PDE4DIPQ5VU43 2346 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 KNL1Q8NG31 2342 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 PCNX1Q96RV3 2341 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 MAP1BP46821 2468 aaKnown RBP0.09□□□□□ -2.4
TOP2B-206ENST00000475717 DSTQ03001 7570 aaKnown RBP0.09□□□□□ -2.4
TOP2B-206ENST00000475717 ATRQ13535 2644 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 CNOT1A5YKK6 2376 aaKnown RBP0.09□□□□□ -2.4
TOP2B-206ENST00000475717 TLN2Q9Y4G6 2542 aa0.09□□□□□ -2.4
TOP2B-206ENST00000475717 MYO18BQ8IUG5 2567 aa0.08□□□□□ -2.4
TOP2B-206ENST00000475717 EPG5Q9HCE0 2579 aa0.08□□□□□ -2.4
TOP2B-206ENST00000475717 STAB1Q9NY15 2570 aa0.08□□□□□ -2.4
TOP2B-206ENST00000475717 CREBBPQ92793 2442 aa0.08□□□□□ -2.4
TOP2B-206ENST00000475717 FASNP49327 2511 aaKnown RBP0.08□□□□□ -2.4
TOP2B-206ENST00000475717 KRTAP6-2Q3LI66 62 aa0.08□□□□□ -2.4
TOP2B-206ENST00000475717 CHD8Q9HCK8 2581 aa0.08□□□□□ -2.4
TOP2B-206ENST00000475717 APC2O95996 2303 aa0.08□□□□□ -2.4
TOP2B-206ENST00000475717 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.08□□□□□ -2.4
TOP2B-206ENST00000475717 CEP250Q9BV73 2442 aa0.07□□□□□ -2.4
TOP2B-206ENST00000475717 DOPEY1Q5JWR5 2465 aa0.07□□□□□ -2.4
TOP2B-206ENST00000475717 NBASA2RRP1 2371 aa0.07□□□□□ -2.4
TOP2B-206ENST00000475717 CCDC168Q8NDH2 2452 aa0.07□□□□□ -2.4
TOP2B-206ENST00000475717 ACACAQ13085 2346 aa0.07□□□□□ -2.4
TOP2B-206ENST00000475717 MYO9AB2RTY4 2548 aa0.07□□□□□ -2.4
TOP2B-206ENST00000475717 CEP290O15078 2479 aa0.06□□□□□ -2.4
TOP2B-206ENST00000475717 MGAM2Q2M2H8 2515 aa0.06□□□□□ -2.4
TOP2B-206ENST00000475717 TLN1Q9Y490 2541 aaKnown RBP0.06□□□□□ -2.4
TOP2B-206ENST00000475717 KRTAP6-1Q3LI64 71 aa0.06□□□□□ -2.4
TOP2B-206ENST00000475717 KRTAP19-6Q3LI70 58 aa0.06□□□□□ -2.4
TOP2B-206ENST00000475717 SPTAN1Q13813 2472 aaKnown RBP0.06□□□□□ -2.4
TOP2B-206ENST00000475717 RIF1Q5UIP0 2472 aaKnown RBP0.06□□□□□ -2.4
TOP2B-206ENST00000475717 MTORP42345 2549 aa0.06□□□□□ -2.4
TOP2B-206ENST00000475717 LRRK2Q5S007 2527 aa0.06□□□□□ -2.4
TOP2B-206ENST00000475717 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
TOP2B-206ENST00000475717 PKD1L2Q7Z442 2459 aa0.05□□□□□ -2.4
TOP2B-206ENST00000475717 STAB2Q8WWQ8 2551 aa0.05□□□□□ -2.4
TOP2B-206ENST00000475717 FAM186AA6NE01 2351 aa0.05□□□□□ -2.4
TOP2B-206ENST00000475717 SPG11Q96JI7 2443 aa0.05□□□□□ -2.4
TOP2B-206ENST00000475717 ACACBO00763 2458 aa0.05□□□□□ -2.4
TOP2B-206ENST00000475717 ACANP16112 2415 aa0.04□□□□□ -2.4
TOP2B-206ENST00000475717 KRTAP20-2Q3LI61 65 aa0.04□□□□□ -2.4
TOP2B-206ENST00000475717 KRTAP20-1Q3LI63 56 aa0.04□□□□□ -2.4
TOP2B-206ENST00000475717 MT4P47944 62 aa0.03□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 13.7 ms