RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 CD52P31358 61 aa-1.75□□□□□ -2.69
LTN1-204ENST00000475344 SMIM27A0A1W2PRY6 76 aa-1.76□□□□□ -2.69
LTN1-204ENST00000475344 MROH2AA6NES4 1674 aa-1.77□□□□□ -2.69
LTN1-204ENST00000475344 K7EMI3 77 aa-1.77□□□□□ -2.69
LTN1-204ENST00000475344 EFCAB6Q5THR3 1501 aa-1.77□□□□□ -2.69
LTN1-204ENST00000475344 DEFB133Q30KQ1 61 aa-1.78□□□□□ -2.69
LTN1-204ENST00000475344 SCRIBQ14160 1630 aa-1.78□□□□□ -2.69
LTN1-204ENST00000475344 LINC00308Q8TCZ7 52 aa-1.79□□□□□ -2.7
LTN1-204ENST00000475344 SMCO4Q9NRQ5 59 aa-1.79□□□□□ -2.7
LTN1-204ENST00000475344 M0R1W7 72 aa-1.8□□□□□ -2.7
LTN1-204ENST00000475344 PDCD5O14737 125 aa-1.81□□□□□ -2.7
LTN1-204ENST00000475344 NMES1Q9C002 83 aa-1.85□□□□□ -2.71
LTN1-204ENST00000475344 TMEM167BQ9NRX6 74 aa-1.85□□□□□ -2.71
LTN1-204ENST00000475344 SYCP2Q9BX26 1530 aa-1.86□□□□□ -2.71
LTN1-204ENST00000475344 DEFB131AP59861 70 aa-1.86□□□□□ -2.71
LTN1-204ENST00000475344 ABCA6Q8N139 1617 aa-1.87□□□□□ -2.71
LTN1-204ENST00000475344 DDX60Q8IY21 1712 aaKnown RBP-1.88□□□□□ -2.71
LTN1-204ENST00000475344 HTN1P15515 57 aa-1.88□□□□□ -2.71
LTN1-204ENST00000475344 RHPN1-AS1Q9BWJ2 59 aa-1.89□□□□□ -2.71
LTN1-204ENST00000475344 TFF3Q07654 80 aa-1.9□□□□□ -2.71
LTN1-204ENST00000475344 NFAT5O94916 1531 aa-1.91□□□□□ -2.72
LTN1-204ENST00000475344 IGIPA6NJ69 53 aa-1.92□□□□□ -2.72
LTN1-204ENST00000475344 SERF2P84101 59 aa-1.92□□□□□ -2.72
LTN1-204ENST00000475344 DEFB124Q8NES8 71 aa-1.94□□□□□ -2.72
LTN1-204ENST00000475344 CLTCL1P53675 1640 aa-1.95□□□□□ -2.72
LTN1-204ENST00000475344 UGGT1Q9NYU2 1555 aa-1.95□□□□□ -2.72
LTN1-204ENST00000475344 IQGAP1P46940 1657 aa-1.96□□□□□ -2.72
LTN1-204ENST00000475344 AGLP35573 1532 aa-1.96□□□□□ -2.72
LTN1-204ENST00000475344 LINC01556Q5JQF7 62 aa-1.96□□□□□ -2.72
LTN1-204ENST00000475344 SMIM2Q9BVW6 85 aa-1.96□□□□□ -2.72
LTN1-204ENST00000475344 EFCAB5A4FU69 1503 aa-1.96□□□□□ -2.72
LTN1-204ENST00000475344 A0A096LNI7 61 aa-1.97□□□□□ -2.72
LTN1-204ENST00000475344 ADCY10Q96PN6 1610 aa-2.01□□□□□ -2.73
LTN1-204ENST00000475344 LINC01590Q5TEZ4 76 aa-2.01□□□□□ -2.73
LTN1-204ENST00000475344 H0YGX0 51 aa-2.02□□□□□ -2.73
LTN1-204ENST00000475344 ABCA5Q8WWZ7 1642 aa-2.02□□□□□ -2.73
LTN1-204ENST00000475344 S100ZQ8WXG8 99 aa-2.03□□□□□ -2.73
LTN1-204ENST00000475344 CPS1P31327 1500 aa-2.03□□□□□ -2.73
LTN1-204ENST00000475344 TOMM7Q9P0U1 55 aa-2.04□□□□□ -2.74
LTN1-204ENST00000475344 TRPM2O94759 1503 aa-2.05□□□□□ -2.74
LTN1-204ENST00000475344 PRXQ9BXM0 1461 aa-2.06□□□□□ -2.74
LTN1-204ENST00000475344 A0A087WWC5 75 aa-2.07□□□□□ -2.74
LTN1-204ENST00000475344 PLNP26678 52 aa-2.08□□□□□ -2.74
LTN1-204ENST00000475344 ABCA10Q8WWZ4 1543 aa-2.11□□□□□ -2.75
LTN1-204ENST00000475344 DUOX1Q9NRD9 1551 aa-2.11□□□□□ -2.75
LTN1-204ENST00000475344 ERICH3Q5RHP9 1530 aa-2.12□□□□□ -2.75
LTN1-204ENST00000475344 NDUFA1O15239 70 aa-2.13□□□□□ -2.75
LTN1-204ENST00000475344 H3BUX3 64 aa-2.17□□□□□ -2.76
LTN1-204ENST00000475344 ABCC8Q09428 1581 aa-2.18□□□□□ -2.76
LTN1-204ENST00000475344 FANCD2Q9BXW9 1451 aa-2.18□□□□□ -2.76
LTN1-204ENST00000475344 A0A096LPF7 62 aa-2.18□□□□□ -2.76
LTN1-204ENST00000475344 APELAP0DMC3 54 aa-2.18□□□□□ -2.76
LTN1-204ENST00000475344 TOP2AP11388 1531 aaKnown RBP-2.19□□□□□ -2.76
LTN1-204ENST00000475344 HTN3P15516 51 aa-2.2□□□□□ -2.76
LTN1-204ENST00000475344 RPL39P62891 51 aaKnown RBP-2.24□□□□□ -2.77
LTN1-204ENST00000475344 SMIM5Q71RC9 77 aa-2.24□□□□□ -2.77
LTN1-204ENST00000475344 ATP7AQ04656 1500 aa-2.26□□□□□ -2.77
LTN1-204ENST00000475344 SAMD9LQ8IVG5 1584 aa-2.26□□□□□ -2.77
LTN1-204ENST00000475344 H3BSH0 61 aa-2.27□□□□□ -2.77
LTN1-204ENST00000475344 CMC2Q9NRP2 79 aa-2.28□□□□□ -2.77
LTN1-204ENST00000475344 RPL39LQ96EH5 51 aaKnown RBP-2.29□□□□□ -2.78
LTN1-204ENST00000475344 MROH2BQ7Z745 1585 aa-2.3□□□□□ -2.78
LTN1-204ENST00000475344 Q9Y3F1 56 aa-2.32□□□□□ -2.78
LTN1-204ENST00000475344 PRCDQ00LT1 54 aa-2.38□□□□□ -2.79
LTN1-204ENST00000475344 COX14Q96I36 57 aa-2.38□□□□□ -2.79
LTN1-204ENST00000475344 TMEM167AQ8TBQ9 72 aa-2.4□□□□□ -2.79
LTN1-204ENST00000475344 K7EIM0 57 aa-2.42□□□□□ -2.8
LTN1-204ENST00000475344 STATHP02808 62 aa-2.44□□□□□ -2.8
LTN1-204ENST00000475344 DEFB108BQ8NET1 73 aa-2.45□□□□□ -2.8
LTN1-204ENST00000475344 SMIM31A0A1B0GVY4 71 aa-2.47□□□□□ -2.8
LTN1-204ENST00000475344 IQGAP2Q13576 1575 aa-2.48□□□□□ -2.81
LTN1-204ENST00000475344 ARHGAP5-AS1Q96IT6 56 aa-2.52□□□□□ -2.81
LTN1-204ENST00000475344 DEFB108AA8MXU0 73 aa-2.53□□□□□ -2.81
LTN1-204ENST00000475344 SNRPGP15A8MWD9 76 aa-2.56□□□□□ -2.82
LTN1-204ENST00000475344 RPL39P5Q59GN2 51 aa-2.66□□□□□ -2.84
LTN1-204ENST00000475344 TOMM5Q8N4H5 51 aa-2.68□□□□□ -2.84
LTN1-204ENST00000475344 SNRPGP62308 76 aaKnown RBP-2.7□□□□□ -2.84
LTN1-204ENST00000475344 GCC2Q8IWJ2 1684 aa-2.74□□□□□ -2.85
Retrieved 78 of 20,778 RNA–protein pairs in 2141.1 ms