RNA–Protein interactions for RNA: ENST00000473295.2

SCN1A-205, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 544 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-205ENST00000473295 V9GYS6 101 aa-1.03□□□□□ -2.57
SCN1A-205ENST00000473295 VPS13AQ96RL7 3174 aa-1.03□□□□□ -2.57
SCN1A-205ENST00000473295 KANTRA0A1W2PQU2 76 aa-1.04□□□□□ -2.58
SCN1A-205ENST00000473295 DEFB131AP59861 70 aa-1.04□□□□□ -2.58
SCN1A-205ENST00000473295 ADIRFQ15847 76 aa-1.04□□□□□ -2.58
SCN1A-205ENST00000473295 DEFB104AQ8WTQ1 72 aa-1.04□□□□□ -2.58
SCN1A-205ENST00000473295 PRXQ9BXM0 1461 aa-1.05□□□□□ -2.58
SCN1A-205ENST00000473295 CEP250Q9BV73 2442 aa-1.05□□□□□ -2.58
SCN1A-205ENST00000473295 CENPFP49454 3210 aa-1.05□□□□□ -2.58
SCN1A-205ENST00000473295 TMEM167BQ9NRX6 74 aa-1.05□□□□□ -2.58
SCN1A-205ENST00000473295 ABRACLQ9P1F3 81 aa-1.05□□□□□ -2.58
SCN1A-205ENST00000473295 MROH2AA6NES4 1674 aa-1.07□□□□□ -2.58
SCN1A-205ENST00000473295 DUOX1Q9NRD9 1551 aa-1.07□□□□□ -2.58
SCN1A-205ENST00000473295 SMIM2Q9BVW6 85 aa-1.07□□□□□ -2.58
SCN1A-205ENST00000473295 ABCA5Q8WWZ7 1642 aa-1.07□□□□□ -2.58
SCN1A-205ENST00000473295 CPS1P31327 1500 aa-1.08□□□□□ -2.58
SCN1A-205ENST00000473295 DEFB133Q30KQ1 61 aa-1.08□□□□□ -2.58
SCN1A-205ENST00000473295 NMES1Q9C002 83 aa-1.08□□□□□ -2.58
SCN1A-205ENST00000473295 Q9H521 79 aa-1.08□□□□□ -2.58
SCN1A-205ENST00000473295 NDUFA1O15239 70 aa-1.09□□□□□ -2.58
SCN1A-205ENST00000473295 RPL39P62891 51 aaKnown RBP-1.09□□□□□ -2.58
SCN1A-205ENST00000473295 S100A13Q99584 98 aa-1.09□□□□□ -2.58
SCN1A-205ENST00000473295 TOMM7Q9P0U1 55 aa-1.09□□□□□ -2.58
SCN1A-205ENST00000473295 ADCY10Q96PN6 1610 aa-1.09□□□□□ -2.58
SCN1A-205ENST00000473295 UTRNP46939 3433 aa-1.09□□□□□ -2.58
SCN1A-205ENST00000473295 CLTCL1P53675 1640 aa-1.1□□□□□ -2.59
SCN1A-205ENST00000473295 H0YGX0 51 aa-1.1□□□□□ -2.59
SCN1A-205ENST00000473295 HTN1P15515 57 aa-1.1□□□□□ -2.59
SCN1A-205ENST00000473295 GNG2P59768 71 aa-1.1□□□□□ -2.59
SCN1A-205ENST00000473295 GNG13Q9P2W3 67 aa-1.1□□□□□ -2.59
SCN1A-205ENST00000473295 TRPM2O94759 1503 aa-1.1□□□□□ -2.59
SCN1A-205ENST00000473295 DEFB124Q8NES8 71 aa-1.11□□□□□ -2.59
SCN1A-205ENST00000473295 RPL39LQ96EH5 51 aaKnown RBP-1.11□□□□□ -2.59
SCN1A-205ENST00000473295 PDCD5O14737 125 aa-1.12□□□□□ -2.59
SCN1A-205ENST00000473295 EFCAB5A4FU69 1503 aa-1.12□□□□□ -2.59
SCN1A-205ENST00000473295 LINC01556Q5JQF7 62 aa-1.13□□□□□ -2.59
SCN1A-205ENST00000473295 LINC01590Q5TEZ4 76 aa-1.13□□□□□ -2.59
SCN1A-205ENST00000473295 RHPN1-AS1Q9BWJ2 59 aa-1.13□□□□□ -2.59
SCN1A-205ENST00000473295 CCDC18Q5T9S5 1454 aa-1.13□□□□□ -2.59
SCN1A-205ENST00000473295 FANCD2Q9BXW9 1451 aa-1.13□□□□□ -2.59
SCN1A-205ENST00000473295 ABCC8Q09428 1581 aa-1.13□□□□□ -2.59
SCN1A-205ENST00000473295 SMCO4Q9NRQ5 59 aa-1.14□□□□□ -2.59
SCN1A-205ENST00000473295 ABCA10Q8WWZ4 1543 aa-1.15□□□□□ -2.59
SCN1A-205ENST00000473295 RB1CC1Q8TDY2 1594 aa-1.15□□□□□ -2.59
SCN1A-205ENST00000473295 PLNP26678 52 aa-1.15□□□□□ -2.59
SCN1A-205ENST00000473295 TOP2AP11388 1531 aaKnown RBP-1.15□□□□□ -2.59
SCN1A-205ENST00000473295 A0A087WWC5 75 aa-1.16□□□□□ -2.6
SCN1A-205ENST00000473295 SAMD9LQ8IVG5 1584 aa-1.17□□□□□ -2.6
SCN1A-205ENST00000473295 ERICH3Q5RHP9 1530 aa-1.18□□□□□ -2.6
SCN1A-205ENST00000473295 APELAP0DMC3 54 aa-1.18□□□□□ -2.6
SCN1A-205ENST00000473295 SERF2P84101 59 aa-1.18□□□□□ -2.6
SCN1A-205ENST00000473295 A0A096LPF7 62 aa-1.19□□□□□ -2.6
SCN1A-205ENST00000473295 CD52P31358 61 aa-1.2□□□□□ -2.6
SCN1A-205ENST00000473295 CMC2Q9NRP2 79 aa-1.2□□□□□ -2.6
SCN1A-205ENST00000473295 S100ZQ8WXG8 99 aa-1.22□□□□□ -2.6
SCN1A-205ENST00000473295 ATP7AQ04656 1500 aa-1.23□□□□□ -2.61
SCN1A-205ENST00000473295 GOLGB1Q14789 3259 aaKnown RBP-1.23□□□□□ -2.61
SCN1A-205ENST00000473295 IQGAP2Q13576 1575 aa-1.25□□□□□ -2.61
SCN1A-205ENST00000473295 K7EIM0 57 aa-1.26□□□□□ -2.61
SCN1A-205ENST00000473295 MROH2BQ7Z745 1585 aa-1.26□□□□□ -2.61
SCN1A-205ENST00000473295 HTN3P15516 51 aa-1.28□□□□□ -2.61
SCN1A-205ENST00000473295 SMIM5Q71RC9 77 aa-1.28□□□□□ -2.61
SCN1A-205ENST00000473295 H3BUX3 64 aa-1.29□□□□□ -2.62
SCN1A-205ENST00000473295 SNRPGP15A8MWD9 76 aa-1.3□□□□□ -2.62
SCN1A-205ENST00000473295 RPL39P5Q59GN2 51 aa-1.33□□□□□ -2.62
SCN1A-205ENST00000473295 ARHGAP5-AS1Q96IT6 56 aa-1.33□□□□□ -2.62
SCN1A-205ENST00000473295 SMIM31A0A1B0GVY4 71 aa-1.34□□□□□ -2.62
SCN1A-205ENST00000473295 DEFB108AA8MXU0 73 aa-1.35□□□□□ -2.63
SCN1A-205ENST00000473295 H3BSH0 61 aa-1.35□□□□□ -2.63
SCN1A-205ENST00000473295 PRCDQ00LT1 54 aa-1.35□□□□□ -2.63
SCN1A-205ENST00000473295 TOMM5Q8N4H5 51 aa-1.36□□□□□ -2.63
SCN1A-205ENST00000473295 TMEM167AQ8TBQ9 72 aa-1.36□□□□□ -2.63
SCN1A-205ENST00000473295 DEFB108BQ8NET1 73 aa-1.42□□□□□ -2.64
SCN1A-205ENST00000473295 SNRPGP62308 76 aaKnown RBP-1.43□□□□□ -2.64
SCN1A-205ENST00000473295 GCC2Q8IWJ2 1684 aa-1.46□□□□□ -2.64
SCN1A-205ENST00000473295 STATHP02808 62 aa-1.52□□□□□ -2.65
SCN1A-205ENST00000473295 COX14Q96I36 57 aa-1.52□□□□□ -2.65
SCN1A-205ENST00000473295 Q9Y3F1 56 aa-1.55□□□□□ -2.66
Retrieved 78 of 20,778 RNA–protein pairs in 79.1 ms