RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
HDAC3-203ENST00000467533 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
HDAC3-203ENST00000467533 COA5Q86WW8 74 aa3.61□□□□□ -1.83
HDAC3-203ENST00000467533 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
HDAC3-203ENST00000467533 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
HDAC3-203ENST00000467533 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
HDAC3-203ENST00000467533 KRTAP3-2Q9BYR7 98 aa3.6□□□□□ -1.83
HDAC3-203ENST00000467533 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
HDAC3-203ENST00000467533 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
HDAC3-203ENST00000467533 MT1LQ93083 61 aa3.56□□□□□ -1.84
HDAC3-203ENST00000467533 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
HDAC3-203ENST00000467533 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
HDAC3-203ENST00000467533 PSPHP1O15172 72 aa3.5□□□□□ -1.85
HDAC3-203ENST00000467533 A0A0D9SG42 100 aa3.49□□□□□ -1.85
HDAC3-203ENST00000467533 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
HDAC3-203ENST00000467533 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
HDAC3-203ENST00000467533 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
HDAC3-203ENST00000467533 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
HDAC3-203ENST00000467533 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
HDAC3-203ENST00000467533 Q1T7F1 81 aa3.43□□□□□ -1.86
HDAC3-203ENST00000467533 A0A1B0GU69 56 aa3.42□□□□□ -1.86
HDAC3-203ENST00000467533 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
HDAC3-203ENST00000467533 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
HDAC3-203ENST00000467533 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
HDAC3-203ENST00000467533 A0A1B0GU33 70 aa3.37□□□□□ -1.87
HDAC3-203ENST00000467533 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
HDAC3-203ENST00000467533 UQCR11O14957 56 aa3.32□□□□□ -1.88
HDAC3-203ENST00000467533 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
HDAC3-203ENST00000467533 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
HDAC3-203ENST00000467533 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
HDAC3-203ENST00000467533 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
HDAC3-203ENST00000467533 CDC42SE1Q9NRR8 79 aa3.26□□□□□ -1.89
HDAC3-203ENST00000467533 A6NED7 52 aa3.25□□□□□ -1.89
HDAC3-203ENST00000467533 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
HDAC3-203ENST00000467533 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
HDAC3-203ENST00000467533 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
HDAC3-203ENST00000467533 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
HDAC3-203ENST00000467533 A8MU10 97 aa3.22□□□□□ -1.89
HDAC3-203ENST00000467533 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
HDAC3-203ENST00000467533 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
HDAC3-203ENST00000467533 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
HDAC3-203ENST00000467533 K7ERS5 55 aa3.15□□□□□ -1.91
HDAC3-203ENST00000467533 ROMO1P60602 79 aa3.14□□□□□ -1.91
HDAC3-203ENST00000467533 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
HDAC3-203ENST00000467533 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
HDAC3-203ENST00000467533 TNP1P09430 55 aa3.07□□□□□ -1.92
HDAC3-203ENST00000467533 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
HDAC3-203ENST00000467533 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
HDAC3-203ENST00000467533 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
HDAC3-203ENST00000467533 MT1AP04731 61 aa3.02□□□□□ -1.93
HDAC3-203ENST00000467533 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
HDAC3-203ENST00000467533 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
HDAC3-203ENST00000467533 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
HDAC3-203ENST00000467533 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
HDAC3-203ENST00000467533 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
HDAC3-203ENST00000467533 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
HDAC3-203ENST00000467533 KRTAP15-1Q3LI76 137 aa2.82□□□□□ -1.96
HDAC3-203ENST00000467533 MT3P25713 68 aa2.79□□□□□ -1.96
HDAC3-203ENST00000467533 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
HDAC3-203ENST00000467533 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
HDAC3-203ENST00000467533 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
HDAC3-203ENST00000467533 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
HDAC3-203ENST00000467533 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
HDAC3-203ENST00000467533 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
HDAC3-203ENST00000467533 INE1O15225 51 aa2.57□□□□□ -2
HDAC3-203ENST00000467533 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
HDAC3-203ENST00000467533 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
HDAC3-203ENST00000467533 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
HDAC3-203ENST00000467533 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
HDAC3-203ENST00000467533 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
HDAC3-203ENST00000467533 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
HDAC3-203ENST00000467533 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
HDAC3-203ENST00000467533 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
HDAC3-203ENST00000467533 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
HDAC3-203ENST00000467533 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
HDAC3-203ENST00000467533 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
HDAC3-203ENST00000467533 PRM1P04553 51 aa1.52□□□□□ -2.17
HDAC3-203ENST00000467533 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms