RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ABCA6Q8N139 1617 aa-4.86□□□□□ -3.19
SMC4-207ENST00000467263 CCDC180Q9P1Z9 1646 aa-4.86□□□□□ -3.19
SMC4-207ENST00000467263 LMO7Q8WWI1 1683 aa-4.89□□□□□ -3.19
SMC4-207ENST00000467263 IGIPA6NJ69 53 aa-4.91□□□□□ -3.2
SMC4-207ENST00000467263 MROH2AA6NES4 1674 aa-4.92□□□□□ -3.2
SMC4-207ENST00000467263 SCRIBQ14160 1630 aa-4.94□□□□□ -3.2
SMC4-207ENST00000467263 DEFB133Q30KQ1 61 aa-4.96□□□□□ -3.2
SMC4-207ENST00000467263 XIRP2A4UGR9 3374 aa-4.96□□□□□ -3.2
SMC4-207ENST00000467263 CDH23Q9H251 3354 aa-5□□□□□ -3.21
SMC4-207ENST00000467263 CD52P31358 61 aa-5.03□□□□□ -3.21
SMC4-207ENST00000467263 SMCO4Q9NRQ5 59 aa-5.05□□□□□ -3.22
SMC4-207ENST00000467263 H0YGX0 51 aa-5.07□□□□□ -3.22
SMC4-207ENST00000467263 PDCD5O14737 125 aa-5.07□□□□□ -3.22
SMC4-207ENST00000467263 BRCA2P51587 3418 aa-5.07□□□□□ -3.22
SMC4-207ENST00000467263 S100ZQ8WXG8 99 aa-5.1□□□□□ -3.23
SMC4-207ENST00000467263 RHPN1-AS1Q9BWJ2 59 aa-5.1□□□□□ -3.23
SMC4-207ENST00000467263 SMIM2Q9BVW6 85 aa-5.13□□□□□ -3.23
SMC4-207ENST00000467263 SYCP2Q9BX26 1530 aa-5.15□□□□□ -3.23
SMC4-207ENST00000467263 UGGT1Q9NYU2 1555 aa-5.16□□□□□ -3.24
SMC4-207ENST00000467263 HTN1P15515 57 aa-5.17□□□□□ -3.24
SMC4-207ENST00000467263 VPS13AQ96RL7 3174 aa-5.18□□□□□ -3.24
SMC4-207ENST00000467263 TFF3Q07654 80 aa-5.22□□□□□ -3.25
SMC4-207ENST00000467263 EFCAB5A4FU69 1503 aa-5.28□□□□□ -3.26
SMC4-207ENST00000467263 A0A096LNI7 61 aa-5.3□□□□□ -3.26
SMC4-207ENST00000467263 AGLP35573 1532 aa-5.3□□□□□ -3.26
SMC4-207ENST00000467263 LINC01590Q5TEZ4 76 aa-5.32□□□□□ -3.26
SMC4-207ENST00000467263 DDX60Q8IY21 1712 aaKnown RBP-5.34□□□□□ -3.26
SMC4-207ENST00000467263 CPS1P31327 1500 aa-5.34□□□□□ -3.26
SMC4-207ENST00000467263 PLNP26678 52 aa-5.4□□□□□ -3.27
SMC4-207ENST00000467263 ABCA10Q8WWZ4 1543 aa-5.42□□□□□ -3.28
SMC4-207ENST00000467263 CLTCL1P53675 1640 aa-5.42□□□□□ -3.28
SMC4-207ENST00000467263 TOMM7Q9P0U1 55 aa-5.43□□□□□ -3.28
SMC4-207ENST00000467263 TRPM2O94759 1503 aa-5.45□□□□□ -3.28
SMC4-207ENST00000467263 A0A087WWC5 75 aa-5.49□□□□□ -3.29
SMC4-207ENST00000467263 DEFB124Q8NES8 71 aa-5.49□□□□□ -3.29
SMC4-207ENST00000467263 ABCA5Q8WWZ7 1642 aa-5.53□□□□□ -3.29
SMC4-207ENST00000467263 NFAT5O94916 1531 aa-5.55□□□□□ -3.3
SMC4-207ENST00000467263 UTRNP46939 3433 aa-5.57□□□□□ -3.3
SMC4-207ENST00000467263 PRXQ9BXM0 1461 aa-5.58□□□□□ -3.3
SMC4-207ENST00000467263 ADCY10Q96PN6 1610 aa-5.6□□□□□ -3.31
SMC4-207ENST00000467263 IQGAP1P46940 1657 aa-5.66□□□□□ -3.32
SMC4-207ENST00000467263 LINC01556Q5JQF7 62 aa-5.67□□□□□ -3.32
SMC4-207ENST00000467263 NDUFA1O15239 70 aa-5.71□□□□□ -3.32
SMC4-207ENST00000467263 DEFB104AQ8WTQ1 72 aa-5.71□□□□□ -3.32
SMC4-207ENST00000467263 SMIM5Q71RC9 77 aa-5.72□□□□□ -3.33
SMC4-207ENST00000467263 DUOX1Q9NRD9 1551 aa-5.83□□□□□ -3.34
SMC4-207ENST00000467263 ABCC8Q09428 1581 aa-5.91□□□□□ -3.36
SMC4-207ENST00000467263 TOP2AP11388 1531 aaKnown RBP-5.94□□□□□ -3.36
SMC4-207ENST00000467263 CMC2Q9NRP2 79 aa-5.96□□□□□ -3.36
SMC4-207ENST00000467263 FANCD2Q9BXW9 1451 aa-5.96□□□□□ -3.36
SMC4-207ENST00000467263 ERICH3Q5RHP9 1530 aa-5.97□□□□□ -3.37
SMC4-207ENST00000467263 H3BUX3 64 aa-6.07□□□□□ -3.38
SMC4-207ENST00000467263 RPL39P62891 51 aaKnown RBP-6.07□□□□□ -3.38
SMC4-207ENST00000467263 GOLGB1Q14789 3259 aaKnown RBP-6.08□□□□□ -3.38
SMC4-207ENST00000467263 SAMD9LQ8IVG5 1584 aa-6.09□□□□□ -3.38
SMC4-207ENST00000467263 ATP7AQ04656 1500 aa-6.15□□□□□ -3.39
SMC4-207ENST00000467263 RPL39LQ96EH5 51 aaKnown RBP-6.24□□□□□ -3.41
SMC4-207ENST00000467263 APELAP0DMC3 54 aa-6.27□□□□□ -3.41
SMC4-207ENST00000467263 MROH2BQ7Z745 1585 aa-6.31□□□□□ -3.42
SMC4-207ENST00000467263 A0A096LPF7 62 aa-6.36□□□□□ -3.43
SMC4-207ENST00000467263 HTN3P15516 51 aa-6.51□□□□□ -3.45
SMC4-207ENST00000467263 SMIM31A0A1B0GVY4 71 aa-6.55□□□□□ -3.46
SMC4-207ENST00000467263 K7EIM0 57 aa-6.61□□□□□ -3.47
SMC4-207ENST00000467263 PRCDQ00LT1 54 aa-6.68□□□□□ -3.48
SMC4-207ENST00000467263 TMEM167AQ8TBQ9 72 aa-6.75□□□□□ -3.49
SMC4-207ENST00000467263 ARHGAP5-AS1Q96IT6 56 aa-6.81□□□□□ -3.5
SMC4-207ENST00000467263 SNRPGP15A8MWD9 76 aa-6.88□□□□□ -3.51
SMC4-207ENST00000467263 Q9Y3F1 56 aa-6.91□□□□□ -3.52
SMC4-207ENST00000467263 IQGAP2Q13576 1575 aa-6.93□□□□□ -3.52
SMC4-207ENST00000467263 H3BSH0 61 aa-6.95□□□□□ -3.52
SMC4-207ENST00000467263 TOMM5Q8N4H5 51 aa-7.19□□□□□ -3.56
SMC4-207ENST00000467263 COX14Q96I36 57 aa-7.25□□□□□ -3.57
SMC4-207ENST00000467263 SNRPGP62308 76 aaKnown RBP-7.35□□□□□ -3.59
SMC4-207ENST00000467263 RPL39P5Q59GN2 51 aa-7.37□□□□□ -3.59
SMC4-207ENST00000467263 DEFB108AA8MXU0 73 aa-7.44□□□□□ -3.6
SMC4-207ENST00000467263 GCC2Q8IWJ2 1684 aa-7.63□□□□□ -3.63
SMC4-207ENST00000467263 DEFB108BQ8NET1 73 aa-7.67□□□□□ -3.64
SMC4-207ENST00000467263 STATHP02808 62 aa-7.98□□□□□ -3.69
Retrieved 78 of 20,778 RNA–protein pairs in 109.2 ms