RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
CNOT4-208ENST00000465721 A0A1B0GU69 56 aa4.65□□□□□ -1.67
CNOT4-208ENST00000465721 SPTSSBQ8NFR3 76 aa4.65□□□□□ -1.67
CNOT4-208ENST00000465721 M0QZ58 72 aa4.64□□□□□ -1.67
CNOT4-208ENST00000465721 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
CNOT4-208ENST00000465721 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
CNOT4-208ENST00000465721 A8MU10 97 aa4.6□□□□□ -1.67
CNOT4-208ENST00000465721 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
CNOT4-208ENST00000465721 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
CNOT4-208ENST00000465721 SEC61GP60059 68 aa4.57□□□□□ -1.68
CNOT4-208ENST00000465721 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
CNOT4-208ENST00000465721 UQCR11O14957 56 aa4.56□□□□□ -1.68
CNOT4-208ENST00000465721 MT3P25713 68 aa4.56□□□□□ -1.68
CNOT4-208ENST00000465721 SPATA8Q6RVD6 105 aa4.55□□□□□ -1.68
CNOT4-208ENST00000465721 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
CNOT4-208ENST00000465721 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
CNOT4-208ENST00000465721 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
CNOT4-208ENST00000465721 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
CNOT4-208ENST00000465721 A0A1B0GU33 70 aa4.43□□□□□ -1.7
CNOT4-208ENST00000465721 MT1EP04732 61 aa4.42□□□□□ -1.7
CNOT4-208ENST00000465721 MT4P47944 62 aa4.35□□□□□ -1.71
CNOT4-208ENST00000465721 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
CNOT4-208ENST00000465721 K7ERS5 55 aa4.3□□□□□ -1.72
CNOT4-208ENST00000465721 MT1GP13640 62 aa4.27□□□□□ -1.73
CNOT4-208ENST00000465721 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
CNOT4-208ENST00000465721 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
CNOT4-208ENST00000465721 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
CNOT4-208ENST00000465721 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
CNOT4-208ENST00000465721 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
CNOT4-208ENST00000465721 MT1MQ8N339 61 aa4.23□□□□□ -1.73
CNOT4-208ENST00000465721 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
CNOT4-208ENST00000465721 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
CNOT4-208ENST00000465721 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
CNOT4-208ENST00000465721 A0A0D9SG42 100 aa4.17□□□□□ -1.74
CNOT4-208ENST00000465721 MT1LQ93083 61 aa4.16□□□□□ -1.74
CNOT4-208ENST00000465721 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
CNOT4-208ENST00000465721 ROMO1P60602 79 aa4.14□□□□□ -1.75
CNOT4-208ENST00000465721 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
CNOT4-208ENST00000465721 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
CNOT4-208ENST00000465721 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
CNOT4-208ENST00000465721 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
CNOT4-208ENST00000465721 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
CNOT4-208ENST00000465721 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
CNOT4-208ENST00000465721 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
CNOT4-208ENST00000465721 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
CNOT4-208ENST00000465721 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
CNOT4-208ENST00000465721 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
CNOT4-208ENST00000465721 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
CNOT4-208ENST00000465721 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
CNOT4-208ENST00000465721 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
CNOT4-208ENST00000465721 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
CNOT4-208ENST00000465721 TNP1P09430 55 aa3.82□□□□□ -1.8
CNOT4-208ENST00000465721 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
CNOT4-208ENST00000465721 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
CNOT4-208ENST00000465721 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
CNOT4-208ENST00000465721 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
CNOT4-208ENST00000465721 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
CNOT4-208ENST00000465721 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
CNOT4-208ENST00000465721 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
CNOT4-208ENST00000465721 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CNOT4-208ENST00000465721 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
CNOT4-208ENST00000465721 MT1AP04731 61 aa3.53□□□□□ -1.84
CNOT4-208ENST00000465721 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
CNOT4-208ENST00000465721 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
CNOT4-208ENST00000465721 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
CNOT4-208ENST00000465721 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CNOT4-208ENST00000465721 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CNOT4-208ENST00000465721 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CNOT4-208ENST00000465721 INE1O15225 51 aa2.94□□□□□ -1.94
CNOT4-208ENST00000465721 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
CNOT4-208ENST00000465721 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
CNOT4-208ENST00000465721 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
CNOT4-208ENST00000465721 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
CNOT4-208ENST00000465721 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
CNOT4-208ENST00000465721 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
CNOT4-208ENST00000465721 PRM1P04553 51 aa2.16□□□□□ -2.06
CNOT4-208ENST00000465721 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
CNOT4-208ENST00000465721 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 75.1 ms