RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 DEFB136Q30KP8 78 aa-0.48□□□□□ -2.49
CLK1-208ENST00000464454 PRUNE2Q8WUY3 3088 aa-0.49□□□□□ -2.49
CLK1-208ENST00000464454 DUOX1Q9NRD9 1551 aa-0.49□□□□□ -2.49
CLK1-208ENST00000464454 ATMQ13315 3056 aa-0.49□□□□□ -2.49
CLK1-208ENST00000464454 SNRPGP62308 76 aaKnown RBP-0.49□□□□□ -2.49
CLK1-208ENST00000464454 MYO9AB2RTY4 2548 aa-0.51□□□□□ -2.49
CLK1-208ENST00000464454 LINC01590Q5TEZ4 76 aa-0.51□□□□□ -2.49
CLK1-208ENST00000464454 CSMD2Q7Z408 3487 aa-0.51□□□□□ -2.49
CLK1-208ENST00000464454 RPL39LQ96EH5 51 aaKnown RBP-0.51□□□□□ -2.49
CLK1-208ENST00000464454 MT1HL1P0DM35 61 aa-0.52□□□□□ -2.49
CLK1-208ENST00000464454 MT1MQ8N339 61 aa-0.52□□□□□ -2.49
CLK1-208ENST00000464454 TOMM7Q9P0U1 55 aa-0.52□□□□□ -2.49
CLK1-208ENST00000464454 KRTAP19-6Q3LI70 58 aa-0.53□□□□□ -2.49
CLK1-208ENST00000464454 TLN1Q9Y490 2541 aaKnown RBP-0.54□□□□□ -2.5
CLK1-208ENST00000464454 VPS13CQ709C8 3753 aa-0.54□□□□□ -2.5
CLK1-208ENST00000464454 MT2AP02795 61 aa-0.54□□□□□ -2.5
CLK1-208ENST00000464454 CENPEQ02224 2701 aa-0.55□□□□□ -2.5
CLK1-208ENST00000464454 MT1GP13640 62 aa-0.55□□□□□ -2.5
CLK1-208ENST00000464454 FREM2Q5SZK8 3169 aa-0.56□□□□□ -2.5
CLK1-208ENST00000464454 DMDP11532 3685 aa-0.57□□□□□ -2.5
CLK1-208ENST00000464454 CFAP54Q96N23 3096 aa-0.57□□□□□ -2.5
CLK1-208ENST00000464454 EP400Q96L91 3159 aa-0.59□□□□□ -2.5
CLK1-208ENST00000464454 CEP250Q9BV73 2442 aa-0.6□□□□□ -2.51
CLK1-208ENST00000464454 DEFB4AO15263 64 aa-0.6□□□□□ -2.51
CLK1-208ENST00000464454 DCHS1Q96JQ0 3298 aa-0.6□□□□□ -2.51
CLK1-208ENST00000464454 LOC400499M0QZD8 3231 aa-0.6□□□□□ -2.51
CLK1-208ENST00000464454 MT1BP07438 61 aa-0.61□□□□□ -2.51
CLK1-208ENST00000464454 CEP350Q5VT06 3117 aa-0.62□□□□□ -2.51
CLK1-208ENST00000464454 SPEGQ15772 3267 aa-0.62□□□□□ -2.51
CLK1-208ENST00000464454 RHPN1-AS1Q9BWJ2 59 aa-0.64□□□□□ -2.51
CLK1-208ENST00000464454 FRYLO94915 3013 aa-0.64□□□□□ -2.51
CLK1-208ENST00000464454 GCC2Q8IWJ2 1684 aa-0.65□□□□□ -2.51
CLK1-208ENST00000464454 WDFY3Q8IZQ1 3526 aa-0.65□□□□□ -2.51
CLK1-208ENST00000464454 VCANP13611 3396 aa-0.65□□□□□ -2.51
CLK1-208ENST00000464454 DNAH14Q0VDD8 3507 aa-0.65□□□□□ -2.51
CLK1-208ENST00000464454 WDFY4Q6ZS81 3184 aa-0.66□□□□□ -2.52
CLK1-208ENST00000464454 PCNTO95613 3336 aa-0.68□□□□□ -2.52
CLK1-208ENST00000464454 K7EIM0 57 aa-0.68□□□□□ -2.52
CLK1-208ENST00000464454 MKI67P46013 3256 aaKnown RBP-0.68□□□□□ -2.52
CLK1-208ENST00000464454 DNAH12Q6ZR08 3092 aa-0.69□□□□□ -2.52
CLK1-208ENST00000464454 DEFB124Q8NES8 71 aa-0.69□□□□□ -2.52
CLK1-208ENST00000464454 SZT2Q5T011 3432 aa-0.69□□□□□ -2.52
CLK1-208ENST00000464454 USP34Q70CQ2 3546 aa-0.69□□□□□ -2.52
CLK1-208ENST00000464454 MUC3AQ02505 3323 aa-0.7□□□□□ -2.52
CLK1-208ENST00000464454 RPS29P62273 56 aaKnown RBP-0.7□□□□□ -2.52
CLK1-208ENST00000464454 ARHGAP5-AS1Q96IT6 56 aa-0.7□□□□□ -2.52
CLK1-208ENST00000464454 UNC80Q8N2C7 3258 aa-0.7□□□□□ -2.52
CLK1-208ENST00000464454 CFAP47Q6ZTR5 3102 aa-0.71□□□□□ -2.52
CLK1-208ENST00000464454 MT1FP04733 61 aa-0.72□□□□□ -2.52
CLK1-208ENST00000464454 DEFB104AQ8WTQ1 72 aa-0.72□□□□□ -2.52
CLK1-208ENST00000464454 PRCDQ00LT1 54 aa-0.73□□□□□ -2.53
CLK1-208ENST00000464454 H3BUX3 64 aa-0.75□□□□□ -2.53
CLK1-208ENST00000464454 A0A096LNI7 61 aa-0.76□□□□□ -2.53
CLK1-208ENST00000464454 DEFB133Q30KQ1 61 aa-0.76□□□□□ -2.53
CLK1-208ENST00000464454 XIRP2A4UGR9 3374 aa-0.77□□□□□ -2.53
CLK1-208ENST00000464454 ASPMQ8IZT6 3477 aa-0.78□□□□□ -2.53
CLK1-208ENST00000464454 CENPFP49454 3210 aa-0.81□□□□□ -2.54
CLK1-208ENST00000464454 BRCA2P51587 3418 aa-0.81□□□□□ -2.54
CLK1-208ENST00000464454 CDH23Q9H251 3354 aa-0.82□□□□□ -2.54
CLK1-208ENST00000464454 TMEM167AQ8TBQ9 72 aa-0.83□□□□□ -2.54
CLK1-208ENST00000464454 HTN1P15515 57 aa-0.84□□□□□ -2.54
CLK1-208ENST00000464454 VPS13AQ96RL7 3174 aa-0.85□□□□□ -2.55
CLK1-208ENST00000464454 CD52P31358 61 aa-0.87□□□□□ -2.55
CLK1-208ENST00000464454 KRTAP19-2Q3LHN2 52 aa-0.87□□□□□ -2.55
CLK1-208ENST00000464454 UTRNP46939 3433 aa-0.87□□□□□ -2.55
CLK1-208ENST00000464454 GOLGB1Q14789 3259 aaKnown RBP-0.88□□□□□ -2.55
CLK1-208ENST00000464454 TTTY10Q9BZA0 68 aa-0.91□□□□□ -2.56
CLK1-208ENST00000464454 H3BSH0 61 aa-0.96□□□□□ -2.56
CLK1-208ENST00000464454 RPL39P5Q59GN2 51 aa-0.96□□□□□ -2.56
CLK1-208ENST00000464454 LINC01556Q5JQF7 62 aa-0.99□□□□□ -2.57
CLK1-208ENST00000464454 A0A096LPF7 62 aa-1.04□□□□□ -2.58
CLK1-208ENST00000464454 DEFB108AA8MXU0 73 aa-1.04□□□□□ -2.58
CLK1-208ENST00000464454 APELAP0DMC3 54 aa-1.11□□□□□ -2.59
CLK1-208ENST00000464454 Q9Y3F1 56 aa-1.14□□□□□ -2.59
CLK1-208ENST00000464454 HTN3P15516 51 aa-1.32□□□□□ -2.62
CLK1-208ENST00000464454 COX14Q96I36 57 aa-1.32□□□□□ -2.62
CLK1-208ENST00000464454 DEFB108BQ8NET1 73 aa-1.35□□□□□ -2.63
CLK1-208ENST00000464454 STATHP02808 62 aa-1.53□□□□□ -2.65
Retrieved 78 of 20,778 RNA–protein pairs in 158 ms