RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 MUC3AQ02505 3323 aa-5.25□□□□□ -3.25
SNORD42A-201ENST00000459584 SCRIBQ14160 1630 aa-5.26□□□□□ -3.25
SNORD42A-201ENST00000459584 NRXN3Q9Y4C0 1643 aa-5.26□□□□□ -3.25
SNORD42A-201ENST00000459584 DDX60Q8IY21 1712 aaKnown RBP-5.26□□□□□ -3.25
SNORD42A-201ENST00000459584 ABCA10Q8WWZ4 1543 aa-5.28□□□□□ -3.26
SNORD42A-201ENST00000459584 PLNP26678 52 aa-5.31□□□□□ -3.26
SNORD42A-201ENST00000459584 CLTCL1P53675 1640 aa-5.33□□□□□ -3.26
SNORD42A-201ENST00000459584 ABCA5Q8WWZ7 1642 aa-5.34□□□□□ -3.26
SNORD42A-201ENST00000459584 USP34Q70CQ2 3546 aa-5.35□□□□□ -3.27
SNORD42A-201ENST00000459584 SMIM2Q9BVW6 85 aa-5.36□□□□□ -3.27
SNORD42A-201ENST00000459584 DNAH14Q0VDD8 3507 aa-5.37□□□□□ -3.27
SNORD42A-201ENST00000459584 IQGAP1P46940 1657 aa-5.4□□□□□ -3.27
SNORD42A-201ENST00000459584 A0A087WWC5 75 aa-5.46□□□□□ -3.28
SNORD42A-201ENST00000459584 MKI67P46013 3256 aaKnown RBP-5.48□□□□□ -3.29
SNORD42A-201ENST00000459584 TRPM2O94759 1503 aa-5.48□□□□□ -3.29
SNORD42A-201ENST00000459584 DNAH12Q6ZR08 3092 aa-5.49□□□□□ -3.29
SNORD42A-201ENST00000459584 XIRP2A4UGR9 3374 aa-5.51□□□□□ -3.29
SNORD42A-201ENST00000459584 NFAT5O94916 1531 aa-5.53□□□□□ -3.29
SNORD42A-201ENST00000459584 CFAP47Q6ZTR5 3102 aa-5.55□□□□□ -3.3
SNORD42A-201ENST00000459584 TTTY10Q9BZA0 68 aa-5.57□□□□□ -3.3
SNORD42A-201ENST00000459584 PRXQ9BXM0 1461 aa-5.61□□□□□ -3.31
SNORD42A-201ENST00000459584 UNC80Q8N2C7 3258 aa-5.61□□□□□ -3.31
SNORD42A-201ENST00000459584 SMIM5Q71RC9 77 aa-5.67□□□□□ -3.32
SNORD42A-201ENST00000459584 ADCY10Q96PN6 1610 aa-5.73□□□□□ -3.33
SNORD42A-201ENST00000459584 ABCC8Q09428 1581 aa-5.73□□□□□ -3.33
SNORD42A-201ENST00000459584 LOC400499M0QZD8 3231 aa-5.75□□□□□ -3.33
SNORD42A-201ENST00000459584 NDUFA1O15239 70 aa-5.76□□□□□ -3.33
SNORD42A-201ENST00000459584 FANCD2Q9BXW9 1451 aa-5.8□□□□□ -3.34
SNORD42A-201ENST00000459584 RHPN1-AS1Q9BWJ2 59 aa-5.81□□□□□ -3.34
SNORD42A-201ENST00000459584 TOMM7Q9P0U1 55 aa-5.81□□□□□ -3.34
SNORD42A-201ENST00000459584 DEFB133Q30KQ1 61 aa-5.82□□□□□ -3.34
SNORD42A-201ENST00000459584 CMC2Q9NRP2 79 aa-5.87□□□□□ -3.35
SNORD42A-201ENST00000459584 LINC01590Q5TEZ4 76 aa-5.89□□□□□ -3.35
SNORD42A-201ENST00000459584 ASPMQ8IZT6 3477 aa-5.91□□□□□ -3.36
SNORD42A-201ENST00000459584 A0A096LNI7 61 aa-6.02□□□□□ -3.37
SNORD42A-201ENST00000459584 HTN1P15515 57 aa-6.02□□□□□ -3.37
SNORD42A-201ENST00000459584 CD52P31358 61 aa-6.12□□□□□ -3.39
SNORD42A-201ENST00000459584 BRCA2P51587 3418 aa-6.13□□□□□ -3.39
SNORD42A-201ENST00000459584 KRTAP19-2Q3LHN2 52 aa-6.16□□□□□ -3.4
SNORD42A-201ENST00000459584 ERICH3Q5RHP9 1530 aa-6.17□□□□□ -3.4
SNORD42A-201ENST00000459584 DUOX1Q9NRD9 1551 aa-6.18□□□□□ -3.4
SNORD42A-201ENST00000459584 VCANP13611 3396 aa-6.22□□□□□ -3.4
SNORD42A-201ENST00000459584 CENPFP49454 3210 aa-6.28□□□□□ -3.41
SNORD42A-201ENST00000459584 CDH23Q9H251 3354 aa-6.36□□□□□ -3.43
SNORD42A-201ENST00000459584 DEFB124Q8NES8 71 aa-6.37□□□□□ -3.43
SNORD42A-201ENST00000459584 SAMD9LQ8IVG5 1584 aa-6.37□□□□□ -3.43
SNORD42A-201ENST00000459584 RPL39P62891 51 aaKnown RBP-6.39□□□□□ -3.43
SNORD42A-201ENST00000459584 TOP2AP11388 1531 aaKnown RBP-6.48□□□□□ -3.45
SNORD42A-201ENST00000459584 SMIM31A0A1B0GVY4 71 aa-6.51□□□□□ -3.45
SNORD42A-201ENST00000459584 VPS13AQ96RL7 3174 aa-6.55□□□□□ -3.46
SNORD42A-201ENST00000459584 RPL39LQ96EH5 51 aaKnown RBP-6.63□□□□□ -3.47
SNORD42A-201ENST00000459584 ATP7AQ04656 1500 aa-6.68□□□□□ -3.48
SNORD42A-201ENST00000459584 MROH2BQ7Z745 1585 aa-6.69□□□□□ -3.48
SNORD42A-201ENST00000459584 SNRPGP15A8MWD9 76 aa-6.78□□□□□ -3.49
SNORD42A-201ENST00000459584 DEFB104AQ8WTQ1 72 aa-6.78□□□□□ -3.49
SNORD42A-201ENST00000459584 IQGAP2Q13576 1575 aa-6.86□□□□□ -3.51
SNORD42A-201ENST00000459584 LINC01556Q5JQF7 62 aa-6.87□□□□□ -3.51
SNORD42A-201ENST00000459584 H3BUX3 64 aa-7.04□□□□□ -3.54
SNORD42A-201ENST00000459584 UTRNP46939 3433 aa-7.12□□□□□ -3.55
SNORD42A-201ENST00000459584 TOMM5Q8N4H5 51 aa-7.18□□□□□ -3.56
SNORD42A-201ENST00000459584 K7EIM0 57 aa-7.47□□□□□ -3.61
SNORD42A-201ENST00000459584 APELAP0DMC3 54 aa-7.55□□□□□ -3.62
SNORD42A-201ENST00000459584 A0A096LPF7 62 aa-7.61□□□□□ -3.63
SNORD42A-201ENST00000459584 ARHGAP5-AS1Q96IT6 56 aa-7.69□□□□□ -3.64
SNORD42A-201ENST00000459584 PRCDQ00LT1 54 aa-7.8□□□□□ -3.66
SNORD42A-201ENST00000459584 TMEM167AQ8TBQ9 72 aa-7.94□□□□□ -3.68
SNORD42A-201ENST00000459584 GCC2Q8IWJ2 1684 aa-7.96□□□□□ -3.68
SNORD42A-201ENST00000459584 HTN3P15516 51 aa-8.05□□□□□ -3.7
SNORD42A-201ENST00000459584 GOLGB1Q14789 3259 aaKnown RBP-8.12□□□□□ -3.71
SNORD42A-201ENST00000459584 SNRPGP62308 76 aaKnown RBP-8.34□□□□□ -3.74
SNORD42A-201ENST00000459584 RPL39P5Q59GN2 51 aa-8.47□□□□□ -3.77
SNORD42A-201ENST00000459584 Q9Y3F1 56 aa-8.54□□□□□ -3.78
SNORD42A-201ENST00000459584 DEFB108AA8MXU0 73 aa-8.61□□□□□ -3.79
SNORD42A-201ENST00000459584 H3BSH0 61 aa-8.67□□□□□ -3.8
SNORD42A-201ENST00000459584 COX14Q96I36 57 aa-9.11□□□□□ -3.87
SNORD42A-201ENST00000459584 DEFB108BQ8NET1 73 aa-9.38□□□□□ -3.91
SNORD42A-201ENST00000459584 STATHP02808 62 aa-10.56□□□□□ -4.1
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms