RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
NIF3L1-209ENST00000454952 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
NIF3L1-209ENST00000454952 SERP1Q9Y6X1 66 aa3.04□□□□□ -1.92
NIF3L1-209ENST00000454952 CHKB-CPT1BH3BT56 60 aa3.03□□□□□ -1.92
NIF3L1-209ENST00000454952 ATP5EP56381 51 aaPredicted RBP3.02□□□□□ -1.93
NIF3L1-209ENST00000454952 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
NIF3L1-209ENST00000454952 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
NIF3L1-209ENST00000454952 SERP2Q8N6R1 65 aa3□□□□□ -1.93
NIF3L1-209ENST00000454952 MT1EP04732 61 aa2.99□□□□□ -1.93
NIF3L1-209ENST00000454952 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
NIF3L1-209ENST00000454952 BRK1Q8WUW1 75 aa2.98□□□□□ -1.93
NIF3L1-209ENST00000454952 CYSTM1Q9H1C7 97 aa2.97□□□□□ -1.93
NIF3L1-209ENST00000454952 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
NIF3L1-209ENST00000454952 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
NIF3L1-209ENST00000454952 MT1GP13640 62 aa2.95□□□□□ -1.94
NIF3L1-209ENST00000454952 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
NIF3L1-209ENST00000454952 KRTAP13-4Q3LI77 160 aa2.92□□□□□ -1.94
NIF3L1-209ENST00000454952 A0A0D9SG42 100 aa2.91□□□□□ -1.94
NIF3L1-209ENST00000454952 MT4P47944 62 aa2.9□□□□□ -1.95
NIF3L1-209ENST00000454952 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
NIF3L1-209ENST00000454952 SPANXA2-OT1Q8N9U9 137 aa2.89□□□□□ -1.95
NIF3L1-209ENST00000454952 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
NIF3L1-209ENST00000454952 H7BZZ5 65 aa2.87□□□□□ -1.95
NIF3L1-209ENST00000454952 Q1T7F1 81 aa2.86□□□□□ -1.95
NIF3L1-209ENST00000454952 MT1MQ8N339 61 aa2.85□□□□□ -1.95
NIF3L1-209ENST00000454952 K7ERS5 55 aa2.84□□□□□ -1.95
NIF3L1-209ENST00000454952 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
NIF3L1-209ENST00000454952 SPINT4Q6UDR6 99 aa2.84□□□□□ -1.95
NIF3L1-209ENST00000454952 SNURFQ9Y675 71 aa2.84□□□□□ -1.95
NIF3L1-209ENST00000454952 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
NIF3L1-209ENST00000454952 MT1LQ93083 61 aa2.83□□□□□ -1.96
NIF3L1-209ENST00000454952 A8MU10 97 aa2.82□□□□□ -1.96
NIF3L1-209ENST00000454952 A0A1B0GU33 70 aa2.8□□□□□ -1.96
NIF3L1-209ENST00000454952 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
NIF3L1-209ENST00000454952 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
NIF3L1-209ENST00000454952 COA5Q86WW8 74 aa2.79□□□□□ -1.96
NIF3L1-209ENST00000454952 KRTAP12-1P59990 96 aa2.78□□□□□ -1.96
NIF3L1-209ENST00000454952 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
NIF3L1-209ENST00000454952 A6NED7 52 aa2.76□□□□□ -1.97
NIF3L1-209ENST00000454952 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
NIF3L1-209ENST00000454952 TNP1P09430 55 aa2.76□□□□□ -1.97
NIF3L1-209ENST00000454952 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
NIF3L1-209ENST00000454952 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
NIF3L1-209ENST00000454952 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
NIF3L1-209ENST00000454952 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
NIF3L1-209ENST00000454952 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
NIF3L1-209ENST00000454952 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
NIF3L1-209ENST00000454952 A0A1B0GU69 56 aa2.69□□□□□ -1.98
NIF3L1-209ENST00000454952 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
NIF3L1-209ENST00000454952 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
NIF3L1-209ENST00000454952 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
NIF3L1-209ENST00000454952 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
NIF3L1-209ENST00000454952 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
NIF3L1-209ENST00000454952 PRR15LQ9BU68 103 aa2.61□□□□□ -1.99
NIF3L1-209ENST00000454952 LINC01558Q9Y6Z2 57 aa2.59□□□□□ -1.99
NIF3L1-209ENST00000454952 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
NIF3L1-209ENST00000454952 KRTAP25-1Q3LHN0 102 aa2.57□□□□□ -2
NIF3L1-209ENST00000454952 ROMO1P60602 79 aa2.55□□□□□ -2
NIF3L1-209ENST00000454952 MIR22HGQ0VDD5 57 aa2.48□□□□□ -2.01
NIF3L1-209ENST00000454952 UQCR11O14957 56 aa2.47□□□□□ -2.01
NIF3L1-209ENST00000454952 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
NIF3L1-209ENST00000454952 MT1AP04731 61 aa2.42□□□□□ -2.02
NIF3L1-209ENST00000454952 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
NIF3L1-209ENST00000454952 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
NIF3L1-209ENST00000454952 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
NIF3L1-209ENST00000454952 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
NIF3L1-209ENST00000454952 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
NIF3L1-209ENST00000454952 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
NIF3L1-209ENST00000454952 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
NIF3L1-209ENST00000454952 INE1O15225 51 aa2.06□□□□□ -2.08
NIF3L1-209ENST00000454952 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
NIF3L1-209ENST00000454952 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
NIF3L1-209ENST00000454952 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
NIF3L1-209ENST00000454952 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
NIF3L1-209ENST00000454952 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
NIF3L1-209ENST00000454952 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
NIF3L1-209ENST00000454952 PRM1P04553 51 aa1.15□□□□□ -2.23
NIF3L1-209ENST00000454952 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 93.8 ms