RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 M0QZ58 72 aa4.17□□□□□ -1.74
HDLBP-213ENST00000427007 SPATA8Q6RVD6 105 aa4.16□□□□□ -1.74
HDLBP-213ENST00000427007 A8MU10 97 aa4.15□□□□□ -1.75
HDLBP-213ENST00000427007 LINC01554Q52M75 96 aa4.14□□□□□ -1.75
HDLBP-213ENST00000427007 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
HDLBP-213ENST00000427007 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
HDLBP-213ENST00000427007 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
HDLBP-213ENST00000427007 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
HDLBP-213ENST00000427007 K7ERS5 55 aa4.03□□□□□ -1.76
HDLBP-213ENST00000427007 A0A0D9SG42 100 aa3.99□□□□□ -1.77
HDLBP-213ENST00000427007 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
HDLBP-213ENST00000427007 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
HDLBP-213ENST00000427007 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
HDLBP-213ENST00000427007 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
HDLBP-213ENST00000427007 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
HDLBP-213ENST00000427007 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
HDLBP-213ENST00000427007 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
HDLBP-213ENST00000427007 ROMO1P60602 79 aa3.83□□□□□ -1.8
HDLBP-213ENST00000427007 MT1EP04732 61 aa3.82□□□□□ -1.8
HDLBP-213ENST00000427007 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
HDLBP-213ENST00000427007 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
HDLBP-213ENST00000427007 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
HDLBP-213ENST00000427007 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
HDLBP-213ENST00000427007 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
HDLBP-213ENST00000427007 MT1GP13640 62 aa3.7□□□□□ -1.82
HDLBP-213ENST00000427007 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
HDLBP-213ENST00000427007 MT4P47944 62 aa3.69□□□□□ -1.82
HDLBP-213ENST00000427007 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
HDLBP-213ENST00000427007 MT1MQ8N339 61 aa3.65□□□□□ -1.83
HDLBP-213ENST00000427007 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
HDLBP-213ENST00000427007 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
HDLBP-213ENST00000427007 MT1LQ93083 61 aa3.62□□□□□ -1.83
HDLBP-213ENST00000427007 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
HDLBP-213ENST00000427007 TNP1P09430 55 aa3.57□□□□□ -1.84
HDLBP-213ENST00000427007 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
HDLBP-213ENST00000427007 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
HDLBP-213ENST00000427007 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
HDLBP-213ENST00000427007 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
HDLBP-213ENST00000427007 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
HDLBP-213ENST00000427007 KRTAP12-3P60328 96 aa3.39□□□□□ -1.87
HDLBP-213ENST00000427007 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
HDLBP-213ENST00000427007 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
HDLBP-213ENST00000427007 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
HDLBP-213ENST00000427007 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
HDLBP-213ENST00000427007 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
HDLBP-213ENST00000427007 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
HDLBP-213ENST00000427007 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
HDLBP-213ENST00000427007 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
HDLBP-213ENST00000427007 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
HDLBP-213ENST00000427007 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
HDLBP-213ENST00000427007 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
HDLBP-213ENST00000427007 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
HDLBP-213ENST00000427007 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
HDLBP-213ENST00000427007 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
HDLBP-213ENST00000427007 MT1AP04731 61 aa3.07□□□□□ -1.92
HDLBP-213ENST00000427007 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
HDLBP-213ENST00000427007 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
HDLBP-213ENST00000427007 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
HDLBP-213ENST00000427007 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
HDLBP-213ENST00000427007 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
HDLBP-213ENST00000427007 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
HDLBP-213ENST00000427007 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
HDLBP-213ENST00000427007 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
HDLBP-213ENST00000427007 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
HDLBP-213ENST00000427007 MT3P25713 68 aa2.81□□□□□ -1.96
HDLBP-213ENST00000427007 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
HDLBP-213ENST00000427007 INE1O15225 51 aa2.57□□□□□ -2
HDLBP-213ENST00000427007 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
HDLBP-213ENST00000427007 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
HDLBP-213ENST00000427007 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
HDLBP-213ENST00000427007 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
HDLBP-213ENST00000427007 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
HDLBP-213ENST00000427007 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
HDLBP-213ENST00000427007 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
HDLBP-213ENST00000427007 PRM1P04553 51 aa1.99□□□□□ -2.09
HDLBP-213ENST00000427007 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
HDLBP-213ENST00000427007 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
HDLBP-213ENST00000427007 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms